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Table 3 Numbers of single nucleotide polymorphisms within and between clades A and B.

From: A Δ11 desaturase gene genealogy reveals two divergent allelic classes within the European corn borer (Ostrinia nubilalis)

  Total sites Polymorphic
Sites
Fixed
Differences
Polymorphic A Monomorphic B Polymorphic B Monomorphic A Shared
Polymorphism
3' Exon 1 11 1 0 1 0 0
   Intron 1 105 11 0 8 3 0
   Exon 2 338 24 10 (2R/8S) 11 (5R/6S) 2 (1R/1S) 1
   Intron 2 903 73 14 32 25 2
5' Exon 3 8 0 0 0 0 0
Total 1365 109 24 52 30 3
  1. These counts do not include the three recombinant sequences; therefore, the total number of polymorphic sites is less than is shown in Table 2 (recombinant sequences add 11 polymorphic sites). Also, this analysis omits any sequence position containing a gap and therefore does not include insertion deletion polymorphism. R = replacement substitution and S = silent substitution.