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Table 1 Species analyzed and their geographic sources

From: Multiple source genes of HAmo SINE actively expanded and ongoing retroposition in cyprinid genomes relying on its partner LINE

Subfamily Taxa Sampling location Ra2 gene
Hypophthalmichthyinae Hypophthalmichthys molitrix Wuhan, Hubei Prov. DQ367002
  Aristichthys nobilis Wuhan, Hubei Prov. DQ367038
Xenocyprinae Distoechodon hupeinensis Jingkou, Hubei Prov. DQ366998 (a)
  Xenocypris argentea Taoyuan, Hunan Prov. DQ367024
Cultrinae Culter alburnus Taoyuan, Hunan Prov. DQ367004
Leuciscinae Leuciscus tumensis Tumen, Jilin Prov. This paper
  Ctenopharyngodon idella Jingkou, Hubei Prov. DQ366996
  Squaliobarbus curriculus Taoyuan, Hunan Prov. DQ367021
  Elopichthys bambusa Taoyuan, Hunan Prov. DQ367016
  Mylopharyngodon piceus Jingzhou, Hunan Prov. DQ367011
Acheilognathinae Rhodeus ocellatus Wuhan, Hubei Prov. This paper
Gobioninae Saurogobio dabryi Wangzhou, Chongqing. DQ367020
Cyprininae Cyprinus carpio Wuhan, Hubei Prov. DQ366994
Labeoninae Garra orientalis Ledong, Hainan Prov. DQ366957
Schizothoracinae Shizothorax grahami Kuming, Yunnan Prov DQ366989 (b)
Barbinae Barbodes opisthoptera Mengla, Yunnan Prov. DQ366952 (c)
Danioninae Opsariichthys bidens Taoyuan, Hunan Prov. DQ367014
  Danio apogon Mengla, Yunnan Prov DQ367039
  Danio rerio GenBank NC_007136
Outgroup Myxocyprinus asiaticus Wuhan, Hubei Prov DQ367043
  Micronemacheilus pulcher Rong'an, Gaungxi Prov. DQ367041
  1. The rag2 sequences of the noted (a b c) three species was substituted by another species in the same genus, because of the absence of their rag2 sequence in ncbi. A: Distoechodon tumirostris B: Schizothorax meridionalis C: Barbodes huangchuchieni