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Table 2 Diversity measures in El Jadida and neighbour populations, within HVRI.

From: The trans-Saharan slave trade - clues from interpolation analyses and high-resolution characterization of mitochondrial DNA lineages

Sample n Different sequences
(%)
Haplotype Diversity (SE) Nucleotide Diversity (SE) Mean no. pairwise differences (SE) Tajima's D (p value) Fu's Fs
(p value)
El Jadida 81 59 (73%) 0.982 (0.008) 0.017 (0.009) 5.945 (2.866) -1.777 (0.007) -25.241 (0.000)
Algeria 86 31 (36%) 0.945 (0.010) 0.013 (0.007) 4.822 (2.377) -1.090 (0.129) -13.198 (0.002)
Morocco Berber 60 38 (63%) 0.963 (0.015) 0.013 (0.007) 4.594 (2.287) -1.862 (0.012) -25.683 (0.000)
Morocco non-Berber 32 29 (91%) 0.988 (0.014) 0.017 (0.009) 6.026 (2.948) -1.735 (0.022) -24.805 (0.000)
Souss 50 34 (68%) 0.961 (0.018) 0.013 (0.007) 4.604 (2.298) -1.551 (0.034) -25.618 (0.000)
Testour 50 36 (72%) 0.958 (0.021) 0.016 (0.009) 5.783 (2.814) -1.867 (0.008) -25.269 (0.000)
Slouguia 28 20 (71) 0.971 (0.018) 0.015 (0.008) 5.254 (2.618) -1.472 (0.055) -10.159 (0.000)
El Alia 48 27 (56%) 0.960 (0.016) 0.015 (0.008) 5.507 (2.695) -1.385 (0.060) -12.910 (0.000)
Qalaat El Andalous 29 17 (59%) 0.946 (0.024) 0.012 (0.007) 4.493 (2.278) -0.946 (0.180) -6.559 (0.003)
Tunis 51 44 (86%) 0.992 (0.006) 0.018 (0.010) 6.512 (3.131) -1.717 (0.024) -25.154 (0.000)
Zriba 35 17 (49%) 0.926 (0.028) 0.015 (0.008) 5.398 (2.665) -1.156 (0.130) -3.863 (0.076)
Kesra 43 30 (70%) 0.960 (0.020) 0.018 (0.010) 6.405 (3.094) -1.611 (0.027) -17.708 (0.000)
Skira 20 14 (70%) 0.937 (0.043) 0.011 (0.007) 4.137 (2.148) -1.598 (0.045) -6.234 (0.003)
Egypt 68 59 (87%) 0.993 (0.005) 0.020 (0.010) 7.075 (3.362) -1.768 (0.016) -25.013 (0.000)
Ethiopia 89 69 (78%) 0.990 (0.005) 0.023 (0.012) 8.145 (3.815) -1.705 (0.018) -24.759 (0.000)
Mauritania 30 23 (77%) 0.975 (0.017) 0.017 (0.009) 6.025 (2.953) -0.738 (0.255) -12.983 (0.000)
Nubia 80 53 (66%) 0.977 (0.008) 0.023 (0.012) 8.203 (3.844) -1.420 (0.056) -24.779 (0.000)
Senegal 50 42 (84%) 0.989 (0.008) 0.017 (0.009) 6.283 (3.032) -1.127 (0.141) -25.208 (0.000)
Serer 23 21 (91%) 0.992 (0.015) 0.023 (0.012) 8.340 (4.009) -1.036 (0.152) -11.679 (0.000)
Libya 129 20 (16%) 0.677 (0.046) 0.011 (0.006) 3.983 (2.005) -1.254 (0.088) -2.726 (0.223)
  1. SE stands for standard error. Values in bold are statistically significant at the 5% level.