Table 1 Examples of RTE insertions in lepidopteran microsatellite loci lacking SSR units at the 3' UTR.
From: Generation of microsatellite repeat families by RTE retrotransposons in lepidopteran genomes
Accession Number | RTE | % identity | E-value | Length (bp) | Nucleotide position | SSR units | Associated microsatellite locus | Host |
|---|---|---|---|---|---|---|---|---|
DQ242755 | BmRTE-d08 | 76% | 6e-22 | 63 | 79 .. 141 | none | S1818-F | B. mori |
| Â | Â | 59% | 6e-22 | 183 | 152..334 | Â | Â | Â |
AJ809357 | BmRTE-d01 | 73% | 3e-27 | 189 | 191 .. 3 | none | Acaja14-(GA03G02) | A. caja |
AY150998 | BmRTE-d05 | 62% | 8e-25 | 237 | 230 .. 466 | none | F-10 T7 | L. botrana |
AY190970 | BmRTE-d09 | 87% | 4e-15 | 117 | 364 .. 480 | none | BBCAA8G1- C3 | B. betularia |
AY226154 | BmRTE-d09 | 87% | 4e-15 | 117 | 364 .. 480 | none | B. betularia microsatellite | B. betularia |
DQ393953 | BmRTE-d10 | 48% | 4e-11 | 144 | 146 .. 3 | none | CP6.89 | C. pomonella |
DQ225299 | BaRTE-d06 | 100% | 1e-07 | 48 | 3 .. 50 | (KAT)4 | BA-ATG244 | B. anynana |
| Â | BaRTE-d03 | 60% | 2e-05 | 60 | 387 .. 328 | (TGA)26 | Â | Â |
AY785062 | BaRTE-d06 | 100% | 2e-05 | 39 | 3 .. 41 | (KAT)12 | BA-ATG1 | B. anynana |
| Â | BaRTE-d03 | 80% | 4e-05 | 45 | 383..339 | none | Â | Â |