Table 2 Intron gain by tandem duplication as suggested by proto-splice sites.
FBgn | Intron | Proto-splice site consensus of the surrounding CDS (all Drosophila species in alignment) | Percentile of the smallest score per position within the reference set RS (RP) | ||
|---|---|---|---|---|---|
Splice site consensus of introns | |||||
0002526 | 1460-0 | CAGGTSATT//YGGATTCCATCAGG | 2.99 (96.61) | // | 7.52 (92.18) |
CAGgtaagw//cattgtccaccagG | 75.49 | // | 18.99 | ||
0029747 | 200-0 | CAGGTHCTH//YAARMGWKTRCAGG | 0.38 (91.34) | // | 9.77 (93.46) |
CAGgtaskk//bshsuymywdyagG | 1.23 | // | 11.28 | ||
207-0 | CAGGCACGC//CAAGTCAYTGCAGG | 0.48 (92.31) | // | 21.59 (96.80) | |
CAGgtrrgy//tktcssmtkgcagG | 29.43 | // | 30.97 | ||
0030661 | 211-0 | GAGGTTATC//CCGAAATTTTGAGG | 1.72 (95.60) | // | 0.25 (74.97) |
GAGgtgaga//agtgcactttcagG | 56.04 | // | 38.86 | ||
0038300 | 44-0 | CAGGCGCTT//TCAATGCCTGCAGG | 0.23 (88.73) | // | 36.08 (98.49) |
CAGgtaagc//cgtttatttttagG | 72.27 | // | 69.96 | ||
54-0 | AAGGTGGAG//RCCGCCTTCMAAGG | 2.22 (96.17) | // | 2.47 (86.57) | |
AAGgtaagw//hbyymykukyyagG | 80.74 | // | 8.28 | ||
0050101 | 251-0 | AAGGTGCCC//CGTCCATATCAAGG | 0.90 (94.17) | // | 3.97 (89.17) |
AAGgtaaga//gttaatcatctagG | 80.74 | // | 17.36 | ||