Locusa | Strain pairb | L1A-L1a | L2A-L2a | L3A-L3a | L4A-L4a | L5A-L5a | L6A-L6a | L7A-L7a | L8(1)A-L8(1)a | L8(2)A-L8(2)a | L9A-L9a | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 | Lineagec | 1 |  |  | 2 |  |  | 3 |  |  | 4 |  |  | 5 |  |  | 6 |  |  | 7 |  |  | 8 |  |  | 8 |  |  | 9 |  |  |
 | Exon sequences (bp) | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id | d N | d S | id |
ro-10 | 590 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
nit-2 | 3293 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.002 | 0 | 0 |
krev-1 | 521 | 0 | 0.008 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.025 | 0 |
sod-1 | 465 | 0 | 0.017 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.009 | 0 |
mus-42 | 1680 | 0 | 0.003 | - | 0 | 0 | - | 0 | 0 | - | 0 | 0 | - | 0 | 0 | - | 0.001 | 0.018 | - | 0 | 0 | - | 0 | 0 | - | 0 | 0 | - | 0.006 | 0.060 | - |
rid | 2560 | 0 | 0.005 | - | 0.001 | 0.004 | - | 0 | 0 | - | 0.010 | 0.033 | - | 0.001 | 0 | - | 0 | 0 | - | 0.001 | 0 | - | 0 | 0 | - | 0.001 | 0 | - | 0.031 | 0.147 | - |
leu-4 | 1863 | 0 | 0 | 0 | 0.002 | 0.028 | 9 | 0 | 0.028 | 3 | 0.001 | 0.007 | 5 | 0.001 | 0.028 | 9 | 0.001 | 0.028 | 10 | 0 | 0.030 | 7 | 0 | 0.014 | 4 | 0 | 0.014 | 4 | 0.004 | 0.059 | 8 |
cys-5 | 883 | 0 | 0 | - | 0 | 0.024 | - | 0.005 | 0.024 | - | 0.002 | 0.034 | - | 0 | 0 | - | 0 | 0 | - | 0.002 | 0.029 | - | 0.003 | 0.015 | - | 0.003 | 0.020 | - | 0.003 | 0.070 | - |
ser-3 | 922 | 0.004 | 0.025 | - | 0 | 0 | - | 0 | 0 | - | 0.002 | 0.004 | - | 0.007 | 0.047 | - | 0.007 | 0.047 | - | 0.002 | 0.004 | - | 0 | 0 | - | 0.002 | 0 | - | 0.006 | 0.074 | - |
tef-1 | 476 | 0 | 0 | 3 | 0 | 0.038 | 18 | 0 | 0.048 | 17 | 0 | 0.019 | 23 | 0 | 0.019 | 16 | 0 | 0.029 | 16 | 0 | 0.009 | 13 | 0 | 0.019 | 19 | 0 | 0.019 | 20 | 0 | 0.048 | 23 |
un-3 | 1924 | 0.001 | 0.031 | - | 0.002 | 0.048 | - | 0.002 | 0.036 | - | 0.002 | 0.028 | - | 0.002 | 0.048 | - | 0.003 | 0.048 | - | 0 | 0.048 | - | 0.001 | 0.019 | - | 0.001 | 0.019 | - | 0.002 | 0.045 | - |
mat | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
upr-1 | 2888 | 0.017 | 0.053 | - | 0.021 | 0.057 | - | 0.016 | 0.065 | - | 0.016 | 0.048 | - | 0.021 | 0.055 | - | 0.021 | 0.055 | - | 0.015 | 0.054 | - | 0.004 | 0.012 | - | 0.004 | 0.012 | - | 0.031 | 0.079 | - |
erg-8 | 1429 | 0 | 0.037 | 3 | 0.005 | 0.063 | 6 | 0 | 0.069 | 4 | 0.001 | 0.066 | 4 | 0.004 | 0.063 | 6 | 0.003 | 0.059 | 6 | 0.001 | 0.046 | 5 | 0.001 | 0.037 | 3 | 0.001 | 0.037 | 3 | 0.003 | 0.076 | 8 |
arg-1 | 1119 | 0 | 0.008 | 10 | 0.001 | 0.043 | 13 | 0 | 0 | 0 | 0 | 0.043 | 11 | 0.001 | 0.051 | 13 | 0.001 | 0.047 | 13 | 0 | 0.031 | 8 | 0 | 0.019 | 10 | 0 | 0.019 | 10 | 0 | 0.051 | 19 |
eth-1 | 866 | 0.005 | 0.005 | 3 | 0.002 | 0.029 | 5 | 0.003 | 0.029 | 3 | 0.002 | 0.034 | 3 | 0.002 | 0.029 | 5 | 0.002 | 0.029 | 5 | 0 | 0.034 | 4 | 0.002 | 0.024 | 2 | 0.002 | 0.024 | 2 | 0.002 | 0.054 | 5 |
centromere | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
lys-4 | 1055 | 0.001 | 0.049 | 23 | 0.004 | 0.053 | 30 | 0.005 | 0.057 | 9 | 0 | 0 | 0 | 0.004 | 0.061 | 17 | 0.004 | 0.061 | 17 | 0.006 | 0.038 | 7 | 0.004 | 0.024 | 13 | 0.020 | 0.020 | 0 | 0.006 | 0.076 | 15 |
cys-9 | 907 | 0 | 0.047 | 7 | 0 | 0.082 | 8 | 0 | 0.037 | 7 | 0 | 0.042 | 6 | 0 | 0.082 | 8 | 0 | 0.082 | 8 | 0.002 | 0.023 | 3 | 0 | 0.037 | 5 | 0 | 0.037 | 9 | 0 | 0.057 | 14 |
ad-9 | 609 | 0.004 | 0.035 | 2 | 0.002 | 0.072 | 1 | 0.002 | 0.057 | 5 | 0.004 | 0.064 | 3 | 0.022 | 0.072 | 1 | 0.002 | 0.072 | 1 | 0.007 | 0.072 | 8 | 0 | 0.007 | 0 | 0 | 0.007 | 0 | 0.004 | 0.049 | 3 |
al-1 | 1637 | 0.002 | 0.032 | 1 | 0.004 | 0.073 | 17 | 0.002 | 0.065 | 18 | 0.001 | 0.029 | 12 | 0.004 | 0.076 | 17 | 0.005 | 0.073 | 17 | 0.002 | 0.073 | 1 | 0.005 | 0.053 | 15 | 0.005 | 0.051 | 15 | 0.004 | 0.054 | 5 |
lys-3 | 3324 | 0 | 0.001 | 0 | 0.001 | 0.062 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.001 | 0.062 | 0 | 0.001 | 0.062 | 0 | 0.002 | 0.031 | 1 | 0.001 | 0 | 0 | 0.001 | 0 | 0 | 0.002 | 0.052 | 5 |
os-1 | 1749 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
prd-4 | 1475 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
arg-13 | 999 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
phr | 1769 | 0 | 0 | 0 | 0 | 0 | 0 | 0.001 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |