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Table 2 Values of energy function: the values of energy function for circular orderings obtained by the N-Net, the MC-Net and the MC-Net with initial ordering of the N-Net.

From: MC-Net: a method for the construction of phylogenetic networks based on the Monte-Carlo method

Data set

Its

Jsa

Mammals

Primates

N-Net

0.4096

0.2808

4.4275

2.1465

MC-Net

0.4079

0.2728

4.4172

2.1410

start N-Net

0.3979

0.2767

4.4202

2.1410

Data set

Rubber

Dolphins

Salmonella

Myosin

N-Net

0.7723

2.2

0.2546

43.8199

MC-Net

0.7596

2.1667

0.2575

43.8019

start N-Net

0.7547

2.2

0.2515

43.6935