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Table 2 Typical temperature ranges for the 11 vertebrate species, and compositional bias of 339 co-orthologs.

From: Amino acid composition in endothermic vertebrates is biased in the same direction as in thermophilic prokaryotes

Class

Species

T (°C)

ERK

%AT-rich

%GC-rich

Mammalia

Mus musculus

36.9

-16.32

23.22

24.56

Mammalia

Rattus norvegicus

37.3

-16.27

22.82

24.91

Mammalia

Human

37

-16.11

23.82

24.31

Mammalia

Bos taurus

38

-15.97

23.14

25.00

Birds

Gallus gallus

39

-16.01

23.59

24.83

Reptilia

Anolis carolinensis

26 (24- 28)

-17.03

23.75

24.45

Amphibia

Xenopus laevis

21(18-22)

-16.53

25.29

22.52

Amphibia

Xenopus tropicalis

25 (23-28)

-16.53

25.22

22.72

Fish

Danio rerio

28.5

-16.76

23.85

23.45

Fish

Tetraodon nigroviridis

27(25-28)

-16.53

25.22

22.72

Fish

Takifugu rubripes

25(23-26)

-17.17

23.31

23.8

p

 

0.0080

0.0075

0.25

0.13

  1. p-values (bottom row) are for comparison of endothermic (mammalia, birds) to ectothermic (reptilia, amphibia, fish) vertebrates, treating each genomic average as a single data point (Wilcoxon rank sum tests). The two last columns list the proportion of AT-rich amino acids (F, Y, M, I, N, K) and GC-rich amino acids (G, A, R, P).