Table 1 Summary of FOXI1 polymorphisms
From: African signatures of recent positive selection in human FOXI1
Derived Allele Frequency | ||||||||
|---|---|---|---|---|---|---|---|---|
N° | Positiona | dbSNP code | Type of changeb | Nucleotide changec | Yoruban (2N = 40) | European (2N = 40) | Asian (2N = 40) | FSTd |
1 | 169465818 | rs2277944 | CS | G/A | 0.58 | 0.20 | 0.35 | 0.123 |
2 | 169466184 | rs2277945 | I | T/C | 0.23 | 0.28 | 0.43 | 0.026 |
3 | 169466367 | rs2112669 | I | C/G | 0.55 | 0.23 | 0.33 | 0.092 |
4 | 169466686 | rs11951903 | I | T/C | 0.05 | 0.00 | 0.25 | 0.162 |
5 | 169466751 | rs4315934 | I | A/G | 0.88 | 0.55 | 0.78 | 0.113 |
6 | 169466837 | rs4315935 | I | A/G | 0.88 | 0.55 | 0.78 | 0.113 |
7 | 169467111 | rs2879269 | I | A/G | 0.03 | 0.10 | 0.00 | 0.042 |
8 | 169467123 | rs7380481 | I | T/C | 0.23 | 0.28 | 0.43 | 0.026 |
9 | 169467572 | rs77136537 | I | G/A | 0.00 | 0.03 | 0.00 | 0.000 |
10 | 169468070 | rs55685928 | CS | G/A | 0.05 | 0.00 | 0.00 | 0.026 |
11 | 169468100 | rs10063424 | CS | C/T | 0.10 | 0.10 | 0.00 | 0.028 |
12 | 169468141 | rs3828625 | CNS | A/G | 0.00 | 0.00 | 0.03 | 0.000 |
13 | 169468312 | rs6873124 | UTR | C/A | 0.53 | 0.20 | 0.33 | 0.091 |
14 | 169468336 | rs55762796 | UTR | A/T | 0.05 | 0.08 | 0.03 | -0.012 |
15 | 169468524 | rs72828668 | UTR | G/C | 0.00 | 0.00 | 0.03 | 0.000 |
16 | 169468633 | rs6555887 | UTR | A/G | 0.15 | 0.10 | 0.00 | 0.051 |
17 | 169468728 | rs6555888 | UTR | A/G | 0.83 | 0.70 | 0.95 | 0.082 |
18 | 169468749 | rs77823283 | UTR | A/G | 0.00 | 0.03 | 0.00 | 0.000 |
19 | 169468769 | UTR | T/A | 0.00 | 0.03 | 0.00 | 0.000 | |
20 | 169469034 | UTR | T/A | 0.03 | 0.00 | 0.00 | 0.000 | |
21 | 169469117 | rs45466695 | UTR | C/T | 0.000 | 0.08 | 0.00 | 0.051 |
22 | 169469123 | rs3839285 | UTR | -/T | 0.53 | 0.20 | 0.33 | 0.091 |