Skip to main content

Advertisement

Table 4 Core haplotypes with significant REHH values in Africans involving FOXI1

From: African signatures of recent positive selection in human FOXI1

Ha REHH Frequency Distance (bp)b Distance (cM)c Core haplotype Genes in core regioni Pvalue qvaluej
0.02 19.58 0.528 80443 0.056 ACCCd DOCK2, FOXI1 0.8 × 10-5 0.0038
0.04 16.93 0.528 61086 0.026 ACCCd DOCK2, FOXI1 0.3 × 10-5 0.0016
0.04 12.08 0.590 -64129 -0.058 AGCe FOXI1 0.6 × 10-4 0.0213
0.04 8.32 0.675 -41241 -0.051 AGf DOCK2, FOXI1 0.8 × 10-4 0.0247
0.04 10.42 0.528 55531 0.028 Ag DOCK2, FOXI1 0.8 × 10-4 0.0191
0.04 10.65 0.561 -54967 -0.053 CTGh DOCK2, FOXI1 1.2 × 10-4 0.0215
  1. aDegree to which each added marker at a further distance causes the extended haplotypes to decay for all core haplotypes
  2. bPhysical distance (bp) from the core at which the signal has been captured. (-) indicates downstream direction. Otherwise upstream
  3. cGenetic distance (cM) from the core at which the signal has been captured. (-) indicates downstream direction. Otherwise upstream
  4. drs7736379, rs6872596, rs4449553, rs17562083
  5. ers7729440, rs2879278, rs11134616
  6. frs4867919, rs11134612
  7. grs1501644
  8. hrs7709558, rs12515896, rs6861611
  9. iGenes within ±100 kb around the core are considered
  10. jExpected proportion of false positives among all significant p values