Table 2 Comparison of null and alternative models by LRT and positively selected sites estimated by Bayes Empirical Bayes.
From: Evidence for positive selection in the gene fruitless in Anastrephafruit flies
Test | Contrast | LRT | D.F. | χ2- Probability | Positively selected sites |
|---|---|---|---|---|---|
Relaxed branch-site | M1a × MA | 40.520 | 2 | p < 10-8 | 16, 25, 31, 49, 61, 64, 65, 83, 105, 111, 131, |
Strict branch-site | Restricted MA × MA | 3.817 | 1 | p < 0.05 | 164, 167, 188, 194, 195 |