Skip to main content

Table 1 Genomic characteristics of bivalve mtDNAs

From: Unusual conservation of mitochondrial gene order in Crassostreaoysters: evidence for recent speciation in Asia

Species GenBank Accession Number Positive strand Protein-coding gene rrnL gene rrnS gene tRNA Largest NCR Reference
   Length bp A+T% No. of AA A+T% Length bp A+T% Length bp A+T% Length bp A+T% Length bp A+T%  
      Total 1st cdn pos. 2nd cdn pos. 3rd cdn pos.          
Lampsilis ornata NC_005335 16,060 62.4 3,710 61.6 56.5 61.6 67.1 1,315 62.8 846 60.5 1,368 64.6 283 64.7 [10]
Inversidens japanensis AB055625 16,826 57.2 3,647 56.6 53.6 59.4 56.9 1,304 58.3 845 56.6 1,416 60.5 1,196 57.5 Okazaki et al, unpublished
Hiatella arctica NC_008451 18,244 66.4 3,968 65.8 61.8 63.4 72.2 1,447 67.0 901 63.0 1,472 67.0 614 66.1 [48]
Acanthocardia tuberculata NC_008452 16,104 59.9 3,636 59.4 55.8 61.0 61.4 1,213 65.2 824 59.5 1,489 57.8 1,103 59.1 [48]
Venerupis philippinarum NC_003354 22,676 69.7 4,211 68.5 62.2 63.0 68.1 1,408 72.8 1,249 70.6 1,459 69.2 2,183 68.2 Okazaki et al, unpublished
Meretrix petechialis NC_012767 19,567 68.3 4,014 66.9 60.5 64.4 75.6 1,581 71.0 1,187 69.4 1,458 68.4 1,634 69.4 [50]
Mytilus galloprovincialis NC_006886 16,744 61.8 3,733 60.5 56.0 62.1 63.3 1,244 65.6 947 64.2 1,517 66.7 1,157 60.2 [46]
Mytilus edulis NC_006161 16,740 61.8 3,681 60.5 56.0 62.0 63.6 1,244 65.3 945 64.1 1,517 66.6 1,158 61.0 [51]
Mytilus trossulus NC_007687 18,652 61.5 3,716 59.5 54.9 62.1 61.6 1,244 66.8 948 63.6 1,584 67.1 1,561 63.9 [47]
Placopecten magellanicus NC_007234 32,115 55.7 3,742 55.7 54.3 58.1 54.6 1,387 58.0 970 52.9 2,294 50.1 3,112 60.4 [42]
Mizuhopecten yessoensis NC_009081 20,414 55.2 3,763 55.5 53.3 58.2 54.9 1,424 57.8 961 50.6 1,079 49.4 1,528 59.9 Sato et al, unpublished
Argopecten irradians DQ665851 16,211 57.3 3,681 57.0 52.7 58.5 59.6 1,292 59.5 904 56.8 1,365 52.5 1,038 63.6 [52]
Chlamys farreri EF473269 20,789 58.7 3,737 58.9 55.2 58.4 63.1 1,479 58.3 953 52.4 1,415 50.5 3,859 63.7 [52]
Crassostrea virginica NC_007175 17,244 61.1 3,696 60.1 55.0 60.5 64.7 1,469 63.7 989 57.2 1,567 61.8 832 65.7 [23]
Crassostrea gigas EU672831 18,225 63.4 3,718 62.8 57.1 60.4 71.0 1,314 65.1 2,242 60.1 1,693 63.4 645 69.8 This study
Crassostrea angulata NC_012648 18,225 63.1 3,717 62.4 57.0 60.3 69.8 1,315 65.2 2,244 60.1 1,691 63.3 643 69.5 This study
Crassostrea sikamea NC_012649 18,243 63.4 3,717 62.7 57.1 60.1 70.9 1,314 64.8 2,232 60.2 1,694 63.4 655 71.5 This study
Crassostrea hongkongensis NC_011518 18,622 65.3 3,701 64.5 58.3 60.0 75.3 1,317 64.8 2,264 61.6 1,704 64.6 608 77.6 [25]
Crassostrea ariakensis NC_012650 18,414 62.9 3,699 62.5 57.0 60.3 70.3 1,318 63.7 2,253 59.4 1,698 63.1 716 67.4 This study