From: Quasispecies-like behavior observed in catalytic RNA populations evolving in a test tube
lineage name | 3D | 3D | 6H | 6H | 6H | 6L | 6L | 6L | 6L |
burst evaluated | 10 | 50 | 5 | 35 | 50 | 22 | 23 | 39 | 42 |
Ne (molecules) | 600 | 600 | 100 | 100 | 100 | 100 | 100 | 100 | 100 |
mutagen (MnCl2) added? | No | No | Yes | Yes | Yes | Yes | Yes | Yes | Yes |
master sequence identity | n/a | n/a | wt | MS1 | MS2 | MS3 | MS1 | MS2 | MS2 |
frequency of most common sequence (%) | 42 | 40 | 77 | 80 | 45 | 68 | 56 | 77 | 62 |
sample size (sequences) | 33 | 48 | 102 | 98 | 108 | 41 | 48 | 53 | 42 |
# of unique genotypes | 12 | 17 | 17 | 15 | 37 | 9 | 10 | 10 | 13 |
Shannon Diversity Index | 1.96 | 2.22 | 1.13 | 1.01 | 2.35 | 1.17 | 1.50 | 0.99 | 1.56 |
mean Hamming distance | 7.2 | 4.5 | 2.0 | 0.95 | 1.4 | 1.5 | 1.2 | 1.3 | 1.3 |