From: FLU, an amino acid substitution model for influenza proteins
 | 1st | 2nd | 3rd | 4th | 5th | 6th | 7th | 8th | 9th | 10th | 11th | 12th | 13th | 14th | 15th |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FLU | 680 | 129 | 147 | 19 | 2 | 4 | 4 | 4 | 1 | 1 | 1 | 0 | 0 | 0 | 0 |
HIVb | 200 | 405 | 198 | 46 | 33 | 64 | 18 | 8 | 7 | 6 | 7 | 0 | 0 | 0 | 0 |
HIVw | 91 | 115 | 200 | 178 | 64 | 58 | 144 | 20 | 29 | 16 | 16 | 61 | 0 | 0 | 0 |
JTT | 14 | 274 | 290 | 398 | 14 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
LG | 5 | 15 | 26 | 75 | 168 | 394 | 189 | 15 | 64 | 21 | 16 | 4 | 0 | 0 | 0 |
CpREV | 2 | 25 | 54 | 204 | 542 | 112 | 13 | 20 | 8 | 7 | 4 | 1 | 0 | 0 | 0 |
WAG | 1 | 28 | 70 | 55 | 134 | 278 | 357 | 43 | 25 | 1 | 0 | 0 | 0 | 0 | 0 |
Dayhoff | 0 | 1 | 0 | 1 | 8 | 18 | 94 | 196 | 209 | 235 | 200 | 24 | 5 | 1 | 0 |
VT | 0 | 0 | 3 | 9 | 17 | 30 | 74 | 226 | 192 | 164 | 178 | 71 | 24 | 4 | 0 |
Blosum62 | 0 | 0 | 3 | 7 | 8 | 18 | 28 | 103 | 84 | 139 | 95 | 436 | 24 | 47 | 0 |
DCMut | 0 | 0 | 1 | 0 | 1 | 9 | 35 | 103 | 176 | 207 | 249 | 199 | 8 | 4 | 0 |
RtREV | 0 | 0 | 0 | 0 | 1 | 5 | 29 | 234 | 175 | 174 | 190 | 157 | 14 | 13 | 0 |
MtMam | 0 | 0 | 0 | 0 | 0 | 2 | 5 | 12 | 10 | 15 | 16 | 14 | 49 | 638 | 230 |
MtREV | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 8 | 11 | 6 | 20 | 25 | 849 | 69 | 3 |
MtArt | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 19 | 216 | 757 |