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Table 2 Some estimated parameters of molecular evolution

From: The sequence, structure and evolutionary features of HOTAIR in mammals

 

Exon1

Exon2

Exon3

Exon4

Exon5

Exon6

DomainA

DomainB

κ

1.81901

2.88324

4.85122

1.92371

5.90266

2.18681

1.50398

1.45864

α

233.20*

137.621

0.66662

0.66759

0.70397

3.14532

2.04029

0.70016

r1/r2a

9.34444

1.88055

0.46272

2.23894

1.06430

1.06613

0.43880

2.78380

 

7.19374

0.83409

0.46463

0.99973

1.78446

1.16327

0.45130

0.92838

r1/r2b

6.65571

0.89836

1.00285

1.01670

0.46319

0.47190

0.55024

2.92695

 

0.39720

0.42971

0.71267

0.45403

0.59854

0.47959

0.74729

1.02247

r 1 /r 2c

16.75779

2.09060

1.40709

2.23928

0.77386

0.98396

0.73568

2.86161

#

0.45376

0.26278

0.03274

0.11204

0.21409

0.47428

0.74774

0.39388

  1. To obtain stable local clock estimations, only two local clocks were specified in each run (see Figure 2B) and the remaining species had rate r0 = 1. *: a large unstable value. #: r2c was not stable because the clade (mouse, rat) was too close to the root.