Figure 5
Non-canonical proportion of MIR159/319 mature products revealed using high throughput sRNA sequencing data. Normalized sequencing abundances (vertical axis) of mature miRNAs corresponding to each partition (horizontal axis) of the MIR159/319 genes are illustrated. For each database, sequencing abundance was normalized to transcripts per mean of total reads of the samples (listed in Additional file 8). The watermarked parts are reads that also match paralogous genes. Details of the databases are listed in Additional file 8. A: Inflorescence tissues of 5-week-old A.thaliana plants. B: Two replicates of Arabidopsis lyrata flowering tissues. C: Samples of Glycine max shown as accession numbers in NCBI GEO. GSM543393: Richland (I/I, yellow seed) immature seed coats; GSM543394: Williams (i-i/i-i yellow seed) immature seed coats; GSM543395: Williams (i-i/i-i yellow seed) immature cotyledons; GSM543396: Williams mutant 55 (i/i, pigmented seed) immature seed coats. D: Tissues from Nicotiana Tabacum plants. E: Tissues from Solanum lycopersicum plants. F: Tissues from Vitis vinifera plants. G: Flag leaves of diploid (FL-dp) and auto-triploid (FL-tp) O.sativa plants. H: 12-day-old seedlings of Oryza sativa. I: Shoots and roots of Z.mays. Zma-MIR319a/b/c/d are analyzed collectively. J: Tissues from Hordeum vulgare plants. K: Tissues from Sorghum bicolor plants. L: Tissues from Cycas rumphii plants. M: S.moellendorffii above-ground tissues. N: Two biological replicates (WT1, WT2) of 10-day-old protonemata of P.patens. The reads for all of the MIR319 genes in moss were included.