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Table 4 Sequence retrieval of 19 DMTs in plants

From: Functional specialization in nucleotide sugar transporters occurred through differentiation of the gene cluster EamA (DUF6) before the radiation of Viridiplantae

 

A

B

C

D

E

F

G

H

I

J

K

L

M

N

O

P

Q

R

S

Zma

119

106

8

75

13

0

16

1

12

17

1

2

0

0

7

0

0

5

0

Osa (jp)

106

67

7

41

5

0

12

1

20

8

1

0

0

0

4

0

0

3

0

Osa (in)

190

102

12

64

13

0

23

1

38

21

1

0

0

0

7

0

0

3

0

Vvi

126

71

18

57

22

1

19

0

34

19

2

0

0

0

1

0

0

0

0

Ptr

110

70

5

48

10

0

13

1

24

21

2

0

0

0

1

1

0

0

1

Psi

24

15

1

10

2

0

0

0

8

3

0

1

0

0

0

0

0

1

0

Ppa

47

34

2

34

4

0

5

1

11

12

2

0

0

0

3

0

0

2

1

Olu

22

21

3

17

5

0

1

0

8

2

0

0

0

0

0

0

0

0

1

Ota

22

23

2

20

2

0

1

0

6

2

0

0

0

0

0

0

0

0

1

  1. Table lists number of full-length sequences found in Pfam full sequence data, using the organisms in [additional file 16: supplementary table S12]: Zma = Zea mays; Osa = Oryza sativa (subsp. japonica/indica); Vvi = Vitis vinifera; Ptr = Populus trichocarpa; Psi = Picea sitchensis; Ppa = Physcomitrella patens; Olu = Ostreococcus lucimarinus; Ota = Ostreococcus tauri. The DMT families are represented by letters: EamA (A); TPT (B); DUF914 (C); UAA (D); NST (E); DUF1632 (F); DUF803 (G); UPF0546 (H); Zip (I); Cation (J); CRCB (K); CRT-like (L); DUF486 (M); DUF606 (N); FAE (O); MDR (P); RhaT (Q); SugT (R); UPF0060 (S).