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Table 1 List of diploid taxa used in the analyses

From: On the genome constitution and evolution of intermediate wheatgrass (Thinopyrum intermedium: Poaceae, Triticeae)

 

GBSSI

trnL-trnF

Aegilops

  

   bicornis Jaub. & Spach

AF07926530

EU01348586

   comosa Sibth. & Sm.

AF07926330

aEU01351486 bEU01351586

   longissima Schweinf., Muschl. & Eig

AF07926630

EU01362086

   markgrafii (Greuter) K. Hammer

AF07926230

AF51911136

   speltoides Tausch

AF07926730

AF51911236

   tauschii Coss.

AF07926830

AF51911336

   umbellulata Zhuk.

AF07926930

EU01368086

   uniaristata Vis.

AF07927030

AF51911436

   searsii Feldman & M. Kislev ex K. Hammer

 

EU01365586

Agropyron

  

   cristatum (L.) Gaert.

AY01100275

AF51911636

   mongolicum Keng

AY01100375

AF51911736

Australopyrum

  

   pectinatum ssp. retrofractum (J.W. Vickery) Á. Löve

AF07927230

AF51911836

   velutinum (Nees) B.K. Simon

AY01100475

AF51911936

Dasypyrum villosum (L.) P. Candargy

#aGU292417#bGU292418

AF51912836

Eremopyrum distans (K. Koch) Nevski

AY01100675

AF51915036

Henrardia persica (Boiss.) C.E. Hubb.

AF07927630

AF51915236

Heteranthelium piliferum Hochst. ex Jaub. & Spach

AF07927730

AF51915336

Hordeum

  

   bogdanii Wilensky

AB154358*

AJ96926737

   brachyantherum Nevski

 

AF51912036

   brachyantherum Nevski ssp. californicum (Covas & Stebbins) Bothmer, N. Jacobsen, Seberg

AF07927330

 

   brevisubulatum (Trin.) Link

AY01096175

AF51912136

   brevisubulatum ssp. violaceum (Boiss & Huet) Tzvelev

AY01096475

 

   bulbosum L.

AY01096275

AF51912236

   comosum J. Presl

 

FM16361787

   euclaston Steud.

 

AJ96935537

   marinum Huds.

AY01095975

AF51912436

   murinum L.

AY01096075

AF51912536

   pusillum Nutt.

EU28232126

AF51912736

   spontaneum K. Koch

AY34934984

AJ96929637

   vulgare L.

AB08771685

AJ96929537

Peridictyon sanctum (Janka) Seberg et al.

AF07927830

AF51915436

Psathyrostachys

  

   fragilis (Boiss.) Nevski

AF07927930

AF51916936

   juncea (Fisch.) Nevski

AF07928030

AF51917036

Pseudoroegneria

  

   libanotica (Hack.) D.R. Dewey

AY36082425

AF51915636

   spicata (Pursh) Á. Löve

aAY01099175 bAY01100075

AF51915836

   spicata ssp. inermis (Scribn., and J.G. Smith) Á. Löve

 

AF51915736

   strigosa (M. Bieb.) Á. Löve

AY36082325

 

   strigosa subsp. aegilopoides (Drobov) Á. Löve

 

AF51915536

   tauri (Boiss. & Balansa) Á. Löve

EU28232626

EF396991*

Secale

  

   cereale L.

AY01100975

AF51916236

   montanum Guss.

AF07928230

AF51916136

   strictum C. Presl ssp. anatolicum (Boiss.) K. Hammer

AY01100875

AF51916336

Taeniatherum caput-medusae (L.) Nevski

aAY01101075 bAY36084825

AF51916436

Thinopyrum

  

   bessarabicum (Savul. & Rayss) Á. Löve

AF07928330

AF51916536

   elongatum (Host) D. R. Dewey

AF07928430

AF51916636

Triticum

  

   boeoticum Boiss.

AF07928530

AF51916836

   monococcum L.

AF07928630

EU01366586

   urartu Thumanjan ex Gandilyan

AF07928730

EU01367486

Bromus tectorum L.

AY36275725

 

Bromus sterilis L.

EF65658929

 
  1. List of taxa used in the analyses with their GenBank accession numbers. Superscript letters after accession numbers refer to the source articles, * - unpublished. a and b refer to different accessions of the same species, #a, #b - sequences from the same individual amplified in this study. For outgroups, see Methods.