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Table 1 Molecular diversity indices for 21 populations of Cephalopholis argus

From: Phylogeography of the reef fish Cephalopholis argus(Epinephelidae) indicates Pleistocene isolation across the indo-pacific barrier with contemporary overlap in the coral triangle

  Cytb GnRH S7
Sample Location N N h h π N N a H O H E P-value N N a H O H E P-value
Marquesas (MQ) 50 8 0.65 ± 0.06 0.002 ± 0.001 34 3 0.21 0.44 0.002 48 9 0.52 0.60 0.596
Moorea (MR) 36 5 0.38 ± 0.10 0.001 ± 0.001 33 2 0.24 0.26 0.549 34 7 0.59 0.60 0.298
Kiritimati (KI) 32 8 0.74 ± 0.05 0.003 ± 0.002 33 3 0.55 0.49 0.335 28 7 0.36 0.40 0.388
Palmyra (PY) 29 6 0.65 ± 0.07 0.002 ± 0.002 30 3 0.30 0.33 0.217 27 6 0.33 0.33 0.337
Samoa/Tokelau (ST) 27 6 0.64 ± 0.07 0.001 ± 0.001 21 4 0.29 0.33 0.044 24 6 0.25 0.34 0.076
Baker/Howland (BH) 27 6 0.68 ± 0.06 0.002 ± 0.001 27 4 0.52 0.55 0.767 27 7 0.37 0.39 0.365
Kwajalein (KW) 22 10 0.86 ± 0.05 0.005 ± 0.003 23 5 0.48 0.52 0.846 23 7 0.26 0.48 < 0.001
Pohnpei (PN) 15 6 0.74 ± 0.09 0.004 ± 0.002 15 3 0.20 0.38 0.055 15 8 0.67 0.67 0.709
Saipan (SP) 19 6 0.77 ± 0.07 0.003 ± 0.002 19 3 0.37 0.56 0.570 18 6 0.56 0.50 0.271
Palau (PA) 22 8 0.77 ± 0.07 0.004 ± 0.002 23 5 0.57 0.47 0.897 23 6 0.52 0.60 0.128
Lizard Island (LI) 12 5 0.67 ± 0.14 0.001 ± 0.001 10 3 0.40 0.35 1.000 7 3 0.29 0.28 1.000
Philippines (PI) 6 4 0.87 ± 0.13 0.009 ± 0.006 5 3 0.60 0.71 1.000 5 4 0.60 0.64 0.644
Bali (BA) 23 7 0.81 ± 0.05 0.005 ± 0.003 19 4 0.47 0.60 0.054 16 7 0.69 0.76 0.322
Scott Reef (SR) 42 8 0.73 ± 0.05 0.004 ± 0.002 41 7 0.56 0.58 0.262 39 8 0.72 0.64 0.897
Rowley Shoals (RS) 40 9 0.81 ± 0.04 0.005 ± 0.003 33 7 0.67 0.65 0.073 30 10 0.80 0.77 0.780
Christmas Island (CM) 49 10 0.83 ± 0.02 0.006 ± 0.004 47 7 0.55 0.57 0.262 49 11 0.71 0.70 0.717
Cocos/Keeling (CK) 40 9 0.87 ± 0.02 0.006 ± 0.004 30 10 0.83 0.78 0.161 29 7 0.72 0.71 0.599
Sumatra (SU) 4 3 0.83 ± 0.22 0.007 ± 0.005 6 5 0.83 0.82 0.703 5 4 0.60 0.71 1.000
Diego Garcia (DG) 33 10 0.87 ± 0.03 0.003 ± 0.002 33 8 0.82 0.80 0.295 33 9 0.76 0.66 0.047
Oman (OM) 9 5 0.81 ± 0.12 0.006 ± 0.003 4 4 0.75 0.64 1.000 7 6 0.71 0.79 0.869
Seychelles (SE) 13 10 0.96 ± 0.04 0.003 ± 0.002 13 5 0.62 0.80 0.054 13 5 0.77 0.70 0.739
All samples 550 55 0.80 ± 0.01 0.005 ± 0.003 499 11   0.58   500 20   0.67  
  1. Sample locations and number of individuals (N) are shown. Number of haplotypes (Nh), haplotype diversity (h), and nucleotide diversity (π) are listed for the cytochrome b dataset. Number of alleles (Na), observed heterozygosity (HO), and expected heterozygosity (HE) are listed for the gonadotropin releasing hormone (GnRH), and S7 ribosomal protein gene (S7) nuclear introns. P-values are the result of exact tests for Hardy-Weinberg equilibrium using a Markov chain with 100,000 steps in ARLEQUIN 3.5 [42].