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Table 2 General features of comparative sequence data set

From: Lineage-specific evolution of the vertebrate Otopetringene family revealed by comparative genomic analyses

   

No.

Clone

Sequence

Total

GenBank

Group

Species

Name

BACs

Gapsa

Gapsb

Sequencec

Accession No.

Otop1 locus

       

Primate

Galago

Otolemur garnettii

4

0

26

763135

DP000201

Carnivore

Dog

Canis familiaris

4

1

25

599455

DP000200

Dasypodidae

Armadillo

Dasypus novemcinctus

4

2

14

566298

DP000198

Monotreme

Platypus

Ornithorhynchus anatinus

1

0

12

115536

DP000202

Ush1g-Otop2-Otop3 locus

       

Primate

Galago

Otolemur garnettii

3

0

16

415030

DP000189

Carnivore

Dog

Canis familiaris

2

0

25

294612

DP000188

Dasypodidae

Armadillo

Dasypus novemcinctus

2

0

19

228380

DP000186

Even-toed ungulate

Cow

Bos taurus

2

1

11

310444

DP000187

Insectivore

Hedgehog

Atelerix albiventris

3

0

16

410814

DP000190

Amphibian

Xenopus

Xenopus tropicalis

1

0

12

153069

DP000192

  1. aNumber of sequence gaps due to the lack of BAC coverage across an interval.
  2. b Number of gaps within the assembled sequences of individual BACs.
  3. c Total non-redundant nucleotides in the assembled sequences of all BACs from that species (As, Gs, Cs, and Ts; not Ns).