Table 2 Diversity Indices and Neutrality tests for geographical region Beringia, North America, Central America and South America based on mtDNA coding region (np 577 - 16023) sequences.
Population/Geographic Region | n b | Nucleotide Diversity (SD)%c | θ k (95% CI) | θ s (SD) | θ π (SD) | Tejima's D | P- value d | Fu's Fs | P- value d |
|---|---|---|---|---|---|---|---|---|---|
Diversity in geographic regions | Â | Â | Â | Â | Â | Â | |||
Beringia | 66 e | 0.0959 (0.0482) | 14.198 (8.4 - 23.4) | 11.136 (3.241) | 14.811 (7.441) | 1.021 | 0.892 | 0.448 | 0.645 |
North America f | 73 | 0.1747 (0.0858) | 1338.057 (469.4 - 4380.0) | 56.465 (14.649) | 27.006 (13.258) | -2.042 | 0.004 | -24.041 | 0.000 |
Central America f | 139a | 0.1735 (0.0846) | 917.489 (532.7 - 1664.5) | 70.373 (16.098) | 26.820 (13.079) | -2.195 | 0.000 | -23.787 | 0.004 |
South America f | 75 | 0.1834 (0.0899) | 413.514 (203.6 - 908.3) | 52.168 (13.563) | 28.326 (13.890) | -1.847 | 0.011 | -24.048 | 0.001 |
Within haplogroup diversity in respective geographic regions | Â | Â | Â | Â | |||||
HaplogroupA2 | Â | Â | Â | Â | |||||
North America | 29 | 0.0615 (0.0323) | 415.445 (108.5 - 1745.1) | 24.485 (7.837) | 9.494 (4.986) | -2.569 | 0.000 | -21.684 | 0.000 |
Central America | 86 | 0.0495 (0.0258) | 465.938 (239.7 - 972.2) | 40.591 (10.376) | 7.651 (3.991) | -2.816 | 0.000 | -24.854 | 0.000 |
South America | 17 | 0.0602 (0.0326) | 141.445 (36.0 - 601.3) | 21.001 (7.691) | 9.294 (5.029) | -2.376 | 0.001 | -9.819 | 0.001 |
Haplogroup B2 | Â | Â | Â | Â | Â | Â | Â | Â | |
North America | 18 | 0.0668 (0.0358) | 158.779 (40.6 - 673.9) | 20.351 (7.364) | 10.320 (5.525) | -2.471 | 0.000 | -10.079 | 0.001 |
Central America | 55 | 0.0539 (0.0281) | 261.236 (120.8 - 614.9) | 28.850 (8.115) | 8.330 (4.346) | -2.598 | 0.000 | -24.826 | 0.000 |
B2 South America | 22 | 0.0586 (0.0313) | 216.779 (55.9 - 916.5) | 18.928 (6.565) | 9.048 (4.832) | -2.415 | 0.000 | -12.381 | 0.000 |
Haplogroup C1 | Â | Â | Â | Â | Â | Â | Â | Â | |
North America | 14 | 0.0487 (0.0271) | 82.112 (20.6 - 352.2) | 13.836 (5.432) | 7.516 (4.193) | -1.994 | 0.009 | -5.519 | 0.005 |
Central America | 61 | 0.0501 (0.0262) | 221.898 (112.1 - 468.9) | 27.351 (7.564) | 7.741 (4.054) | -2.510 | 0.000 | -24.908 | 0.000 |
South America | 17 | 0.0527 (0.0288) | 57.228 (18.5 - 196.2) | 14.790 (5.520) | 8.147 (4.451) | -1.908 | 0.017 | -5.787 | 0.012 |
Haplogroup D1 | Â | Â | Â | Â | Â | Â | Â | Â | |
North America | 12 | 0.0363 (0.0211) | 69.779 (17.4 - 300.2) | 10.596 (4.402) | 5.606 (3.259) | -2.125 | 0.001 | -7.565 | 0.000 |
Central America | 17 | 0.0425 (0.0237) | 141.445 (36.0 - 601.3) | 12.719 (4.796) | 6.574 (3.657) | -2.235 | 0.002 | -12.457 | 0.000 |
South America | 19 | 0.0491 (0.0268) | 45.013 (16.5 - 133.6) | 12.017 (4.436) | 7.591 (4.141) | -1.488 | 0.047 | -6.217 | 0.004 |