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Table 1 Number of SNPs and average derived-allele frequency (DAF) for different mutation types in different annotation categories

From: The tendency to recreate ancestral CG dinucleotides in the human genome

  Non-CpG island region CpG island region
  Intergenic Genic Intergenic Genic
Mutation type* SNPs DAF SNPs DAF SNPs DAF SNPs DAF
All 88447 0.324 79241 0.317 1053 0.34 3120 0.316
Tsd 3752 0.314 4722 0.303 158 0.301 461 0.3
C-Tsd 22539 0.311 19525 0.303 286 0.324 861 0.309
Tsg 10235 0.353 9396 0.344 100 0.406 240 0.373
C-Tsg 21567 0.33 19866 0.326 138 0.401 403 0.339
Tvd 419 0.333 400 0.322 66 0.312 196 0.325
C-Tvd 14100 0.317 11667 0.309 140 0.337 461 0.3
Tvg 3415 0.306 3345 0.304 50 0.385 169 0.309
C-Tvg 12481 0.33 10935 0.319 108 0.346 354 0.302
  1. * The symbols used here are identical to that in the text, with the prefix of C- denoting the corresponding control dataset.