Accurate discrimination of bHLH domains in plants, animals, and fungi using biologically meaningful sites

Table 3 Discerning ability of canonical variates for each Canonical Variate Analysis

Factor Score	CV	Var	Grps	Amino Acid Sites	all Amino Acid Sites
pah	1	66.5%	P	50,54	9, 13, 20, 23, 50, 53, 57
	2	33.5%	A, F	13, 23	10, 16, 27
pss	1	61.9%	A	12, 13	6, 13, 20, 23, 54
	2	38.1%	P, F	23, 53	10, 23
ms	1	71.6%	P	20, 50	13, 20, 23, 54
	2	28.4%	A, F	12, 23	12, 13, 16, 23
cc	1	56.6%	F	5, 10	13
	2	43.4%	P, A	2, 50	10, 12
ec	1	69.1%	P	20, 27, 51, 54	9, 13, 16, 20, 23, 27, 51, 54, 57, 61
	2	30.9%	A, F	16, 20, 54	12, 20, 27, 51, 54
all	1	62.4%	P	*	-
	2	37.6%	A, F	*	-

NOTE.–The variance between plant, animal, and fungal sequences explained by each canoncial variate (CV) is reported. The type of sequences (Grps) that are separated by each CV is also shown. Within each CV, the top 2 amino acid sites (as ranked by weight) and those sites with weights >1 are provided. CV1 and CV2 in the all analysis had 27 and 16 discerning sites, respectively (all Amino Acid Sites).

ISSN: 2730-7182