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Table 1 Mycetozoan and representative amoebozoan isolates

From: Polyphyletic origin of the genus Physarum(Physarales, Myxomycetes) revealed by nuclear rDNA mini-chromosome analysis and group I intron synapomorphy

Species

Isolate(a)

SSU(b)

Accession no(c)

MYCETOZOA (d)

Myxomycetes (plasmodial slime molds)

Physarales (Order)

Didymium iridis

Pan2

+

AJ938153

Physarum polycephalum

Wis1

+

X13160

Stemonitales (Order)

Comatricha nigricapillitia

AMFD114

+

AY643824

Stemonites flavogenita

ATCC24714

+

HE655085

Trichiales (Order)

Arcyria stipata

AMFD257

+

EF513170

Trichia persimilis

--

+

AY643826

Liceales (Order)

Cribraria cancellata

AMFD94

+

EF513177

Echinosteliales (Order)

Echinostelium minutum

ATCC22345

+

HE655087

Protostelids

Soliformovum irregulare

ATCC26826

+

HE655088

Dictyostelids (cellular slime molds)

Acytostelium ellipticum

ATCC22247

+

HE655086

Acytostelium leptosomum

FG12

+

AM168111

Acytostelium subglobosum

LB1

+

AM168110

Dictyostelium discoideum

--

+

K02641

Dictyostelium fasciculatum

SH3

+

AM168087

Dictyostelium medusoides

OH592

+

AM168088

Dictyostelium rhizopodium

AusKY-4

+

AM168063

Acrasids

Acrasis rosea

T-235

+

AF011458

AMOEBOZOA

Amoeba leningradensis

CCAP1503/6

+

AJ314605

Acanthamoeba palestinensis

CCAP1547/1

+

L09599

Entamoeba histolytica

HM1-IMSS

+

X65163

Filamoeba nolandi

ATCC50430

+

AF293896

Gephyramoeba sp.

ATCC50654

+

AF293897

Hartmannella abertawensis

Page180

+

DQ190241

Mastigella commutans

--

+

AF421219

Naegleria gruberi

NEG-M

+

AB298288

Platyamoeba placida

--

+

AY294150

  1. (a) Source of the organism (see Additional file 8: Table S4).
  2. (b) SSU rDNA sequence.
  3. (c) GenBank/EMBL/DDJB accession numbers.
  4. (d) Species are grouped into phyla of Protist.
  5. --, no isolate name given; +, analysed.