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Table 3 Likelihood ratio test (LRT) P values for nested Clade model C (CmC) comparisons

From: Complex patterns of divergence among green-sensitive (RH2a) African cichlid opsins revealed by Clade model analyses

Null model

Alternative model

     
 

M1a

M2a_rel

CmC α

CmC β

CmC αβ

CmC βT

CmC αβMVR & βT

< 0.0001 (4)

< 0.0001 (2)

-

-

0.0408 (1)

0.0022 (1)

CmC α & β

< 0.0001 (4)

< 0.0001 (2)

< 0.0001 (1)

0.0226 (1)

0.4251 (1)

-

CmC αβ

< 0.0001 (3)

< 0.0001 (1)

-

-

-

-

CmC α

0.0124 (3)

0.0925 (1)

-

-

-

-

CmC β

< 0.0001 (3)

0.0001 (1)

-

-

-

-

CmC βT

< 0.0001 (3)

0.0001 (1)

-

-

-

-

  1. Degrees of freedom for each LRT are indicated in parentheses.