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Table 3 Neighboring gene families analyzed for conserved synteny in the SSTR2, -3 and - 5 -bearing chromosome blocks

From: The evolution of vertebrate somatostatin receptors and their gene regions involves extensive chromosomal rearrangements

Symbola

Descriptiona

Root (if other than D. melanogaster)

ADAP

ArfGAP with dual PH domains

 

ATP2A

ATPase, Ca++ transporting, cardiac muscle, fast twitch

 

C1QTNF

C1q and tumor necrosis factor related protein

B. floridae

CABP

Calcium binding protein 1, 3, 4 and 5

 

CACNA1

Calcium channel, voltage dependent, T type alpha subunit

 

CREBBP

CREB binding protein

 

CYTH

Cytohesin

 

FAM20

Family with sequence similarity 20

 

FNG

Fringe homolog b

 

FSCN

Fascin homolog 1 and 2, actin-bundling protein

 

GGA

Golgi-associated, gamma adapting ear containing, ARF-binding protein

 

GLPR

Glucagon, glucagon-like and gastric inhibitory polypeptide receptors

C. intestinalis

GRIN2

Glutamate receptor, ionotropic, N-methyl D-aspartate 2

 

KCNJ

Potassium inwardly-rectifying channel, subfamily J member 2, 4, 12 and 14

C. intestinalis

KCTD

Potassium channel tetramerisation domain containing 2, 5 and 17

 

METRN

Meteorin, glial cell differentiation regulator

B. floridae

NDE

nudE nuclear distribution gene E homolog

 

RAB11FIP

RAB11 family interacting protein 3 and 4 (class II)

 

RADIL

Ras association and DIL domains/Ras interacting protein

B. floridae

RHBDF

Rhomboid 5 homolog

 

RHOT

Ras homolog gene family, member T1 and T2

 

RPH3A

Rabphilin 3A homolog/double C2-like domains, alpha

 

SDK

Sidekick cell adhesion molecule

C. elegans

SOX

Sex-determining region Y-box 8, 9 and 10

 

TEX2

Testis expressed 2

 

TNRC6

Trinucleotide repeat containing 6

 

TOM1

Target of myb1

 

TTYH

Tweety homolog

 

USP

Ubiquitin specific peptidase 31 and 43

 

WFIKKN

WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain contaning

B. floridae

  1. a Gene family names and descriptions follow the same system as Table 2.
  2. b Complete description: Lunatic, manic and radical fringe homolog. O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.