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Table 2 Substitutions that remain as polymorphisms at transfer number 90 in the bacteriophage Qβ evolved in the presence of AZC

From: Evolution at increased error rate leads to the coexistence of multiple adaptive pathways in an RNA virus

Substitution

Gene1

change2

First detected3

U1520C

Coat

Syn

50

C1604G

Coat

Syn

60

C2059G

Read-through

T/S

60

A2277G

Read-through

K/E

90

C2378G

Replicase

N/K

90

C2384(G+U)

Replicase

Syn

60

C2471G

Replicase

Syn

30

A2982G

Replicase

T/A

50

C3413(U+G)

Replicase

Syn

50

C3545A

Replicase

Syn

70

U3582C

Replicase

Y/H

50

C3879G

Replicase

L/V

70

G3945A

Replicase

G/S

40

U3989C

Replicase

Syn

30

A4006G

Replicase

K/R

60

  1. 1Location of each substitution in the genome of the bacteriophage Qβ.
  2. 2Type of change produced by each nucleotide substitution. In the case of non synonymous changes, the amino acid substitution is indicated.
  3. 3Transfer number at which each substitution was first detected as a double band in the chromatogram corresponding to the consensus sequence of that population. The genomic region analyzed comprised from nucleotide 180 to 4180.