Name | Locus | Nucleotides (bp) | Variable sites | Parsimony-informative sites | p-distance | SE | Model of evolution |
---|---|---|---|---|---|---|---|
Nuclear | Combined | 7276 | 690 | 412 | 0.017 | 0.001 | TVM+G |
D2 | Flanking region of the microsatellite loci D2 | 393 | 55 | 34 | 0.028 | 0.004 | TIM3+G |
D8 | Flanking region of the microsatellite loci D8 | 516 | 59 | 37 | 0.019 | 0.003 | TPM2uf+G |
T36 | Flanking region of the microsatellite loci T36 | 394 | 45 | 33 | 0.024 | 0.004 | HKY |
X-src | Tyrosine kinase | 520 | 66 | 45 | 0.024 | 0.003 | TVM+I |
Rag1 | Recombination activating gene | 1574 | 64 | 40 | 0.007 | 0.001 | TIM3+G |
GNG13 | Guanine nucleotide binding protein (G protein) subunit gamma 13 (1st intron) | 531 | 46 | 33 | 0.017 | 0.003 | TPM2uf |
G6PD | Glucose-6-phosphate dehydrogenase (6th intron) | 526 | 48 | 27 | 0.018 | 0.003 | HKY+G |
UNG | Uracil-DNA-glycosylase (4th intron) | 277 | 18 | 10 | 0.011 | 0.003 | JC+G |
POLB | DNA polymerase beta (7th to 11th intron) | 672 | 43 | 22 | 0.01 | 0.002 | TPM3uf+G |
FEN1 | Flap structure-specific endonuclease 1 (3rd intron) | 827 | 123 | 63 | 0.021 | 0.003 | TPM3uf+G |
TP53 | Tumor protein p53 (4th intron) | 1046 | 123 | 68 | 0.024 | 0.003 | TPM1uf+G |
mtDNA | Combined | 1239 | 291 | 192 | 0.051 | 0.003 | TPM1uf+I+G |
cytb | Cytochrome b | 360 | 112 | 67 | 0.059 | 0.006 | TPM1uf+I+G |
D-loop | Control region | 879 | 179 | 125 | 0.047 | 0.004 | TIM2+I+G |