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Table 1 Estimates of codon-based evolutionary divergence between P. caudatum Hsp70 genes

From: Convergent evolution of heat-inducibility during subfunctionalization of the Hsp70 gene family

 

Paramecium caudatumPcHsp70

 

CY1a

CY1b

CY1c

CY2a

CY2b

ER1a

ER1b

ER2a

ER2b

ER2c

MT1a

PcHsp70

           

 CY1a

 

0.00

0.00

0.10

0.12

0.27

0.27

0.29

0.29

0.29

0.31

 CY1b

0.01

 

0.00

0.10

0.12

0.27

0.27

0.29

0.29

0.29

0.31

 CY1c

0.03

0.02

 

0.10

0.12

0.27

0.27

0.29

0.29

0.29

0.31

 CY2a

0.76

0.75

0.74

 

0.02

0.26

0.26

0.28

0.28

0.28

0.30

 CY2b

0.77

0.76

0.75

0.03

 

0.26

0.26

0.28

0.28

0.28

0.31

 ER1a

0.65

0.65

0.65

0.62

0.61

 

0.00

0.13

0.13

0.13

0.34

 ER1b

0.65

0.65

0.65

0.62

0.61

0.00

 

0.13

0.13

0.13

0.34

 ER2a

0.66

0.66

0.65

0.61

0.64

0.57

0.58

 

0.00

0.00

0.35

 ER2b

0.66

0.66

0.65

0.61

0.64

0.57

0.57

0.01

 

0.00

0.35

 ER2c

0.65

0.65

0.65

0.61

0.64

0.57

0.57

0.01

0.00

 

0.35

 MT1a

0.65

0.64

0.65

0.58

0.59

0.62

0.62

0.64

0.64

0.64

 
  1. The number of synonymous differences per synonymous site (d S ) (below diagonal) and of nonsynonymous differences per nonsynonymous site (d N ) (above diagonal) for comparisons of eleven P. caudatum hsp70 homologs are shown. Analyses were conducted using the Nei-Gojobori model included in MEGA5. All ambiguous positions were removed for each sequence pair with a total of 465 amino acid positions in the final dataset.
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BMC Ecology and Evolution

ISSN: 2730-7182

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