From: A multilocus timescale for oomycete evolution estimated under three distinct molecular clock models
Species | Strain/version | Genome source | Reference |
---|---|---|---|
Achlya hypogyna | ATCC48635 | unpublished data | (unpublished) |
Albugo laibachii | Nc14 | NCBI BLAST (http://blast.ncbi.nlm.nih.gov) | [37] |
Ectocarpus siliculosus | Ec32 | [38] | |
Fragilariopsis cylindrus | CCMP1102 v1.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | (unpublished) |
Hyaloperonospora arabidopsis | Emoy2 v8.3.2 | Virginia Bioinformatics Institute (http://www.vbi.vt.edu) | [39] |
Phaeodactylum tricornutum | CCAP1055/1 v2.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | [40] |
Phytophthora capsici | LT1534 v11.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | [41] |
Phytophthora cinnamomi | v1.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | (unpublished) |
Phytophthora infestans | T30-4 | Broad Institute (http://www.broadinstitute.org) | [42] |
Phytophthora parasitica | INRA-310 | Broad Institute (http://www.broadinstitute.org) | (unpublished) |
Phytophthora ramorum | Pr-102 v1.1 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | [43] |
Phytophthora sojae | P6497 v3.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | [43] |
Pseudo-nitzschia multiseries | CLN-47 v1.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | (unpublished) |
Pythium ultimum | BR144 v4.0 | Pythium Genome Database (http://pythium.plantbiology.msu.edu) | [44] |
Saprolegnia parasitica | CBS223.65 | Broad Institute (http://www.broadinstitute.org) | [45] |
Tetrahymena thermophila | SB210 v2008 | Tetrahymena Genome Database (http://ciliate.org) | [46] |
Thalassiosira pseudonana | CCMP1335 v3.0 | DOE-Joint Genome Institute (http://www.jgi.doe.gov) | [47] |
Thraustotheca clavata | ATCC34112 | unpublished data | (unpublished) |