From: Do North Atlantic eels show parallel patterns of spatially varying selection?
Locus | Gene | AR | AA | ||
---|---|---|---|---|---|
Ho | He | Ho | He | ||
40S_S18_1401 | 40s ribosomal protein s18 | 0.389 | 0.375 | 0.344 | 0.312 |
60S_L10A_21874 | 60s ribosomal protein L10a | 0.250 | 0.219 | 0.282 | 0.306 |
ACT_A3B_8646 | Actinin alpha 3b | 0.300 | 0.255 | 0.006 | 0.006 |
ACTB_21752 | Beta-actin | 0.474 | 0.411 | 0.213 | 0.244 |
ACYL_13914 | Acyl carrier protein | 0.421 | 0.388 | 0.320 | 0.310 |
ADH_3 | Alcohol dehydrogenase class-3 | 0.263 | 0.361 | 0.229 | 0.351 |
ADSS_L1_15447 | Adenylosuccinate synthetase isozyme 1 | 0.158 | 0.229 | 0.016 | 0.016 |
ALD_R | Aldose reductase | 1.000 | 0.500 | 0.395 | 0.345 |
ALDH_2_16634 | Aldehyde dehydrogenase 2 | 0.947 | 0.499 | 0.468 | 0.428 |
ANK_R_13478 | Ankyrin repeat domain-comtaining protein 1 | 0.250 | 0.289 | 0.000 | 0.000 |
ANN_A11_16176 | Annexin A11 | 0.200 | 0.180 | 0.171 | 0.172 |
ANX_2_249 | Annexin A2-A | 0.100 | 0.375 | 0.016 | 0.034 |
ARF_4_18099 | ADP-ribsylation factor 4 | 0.444 | 0.346 | 0.019 | 0.019 |
ATP_BC_259 | ATP-bindincasette sub-family A member 1 | 0.450 | 0.439 | 0.022 | 0.022 |
BPNT_1_18778 | 3′(5′),5′-biphosphate nucleotidase 1 | 0.263 | 0.411 | 0.025 | 0.025 |
CLIC_5_10148 | Chloride intracellular channel 5 | 0.250 | 0.219 | 0.521 | 0.492 |
COI_17591 | Cytochrome oxidase subunit I | 0.000 | 0.000 | 0.010 | 0.009 |
COP_9_18132 | 266S protease regulatory subunit 7 | 0.300 | 0.255 | 0.035 | 0.034 |
CSDE_1_11069 | Cold shock domain-containing protein E1 | 0.316 | 0.266 | 0.019 | 0.019 |
CSDE_1_19713 | Cold shock domain-containing protein E1 | 0.474 | 0.411 | 0.066 | 0.064 |
CST_21113 | Cystatin precursor | 0.421 | 0.499 | 0.379 | 0.393 |
CYT_BC1_9061 | Cytochrome b-c1 complex subunit 2 | 0.200 | 0.180 | 0.000 | 0.000 |
EF_1G_4796 | Translation elongation factor 1 gamma | 0.400 | 0.320 | 0.000 | 0.000 |
EF2_10494 | Translation elongation factor 2 | 0.200 | 0.180 | 0.000 | 0.000 |
EIF_3F_341 | Translation elongation factor 3 subunit F | 0.211 | 0.332 | 0.113 | 0.146 |
EIF_3J_11587 | Translation elongation factor 3 subunit J | 0.300 | 0.375 | 0.079 | 0.082 |
FER_H_20955 | Ferritin heavy subunit | 0.421 | 0.432 | 0.009 | 0.009 |
FGB_47 | Fibrinogen Beta Chain | 0.300 | 0.255 | 0.000 | 0.000 |
GAPDH_20355 | Glyceraldehyde-3-phoshpate dehydrogenase | 0.200 | 0.180 | 0.222 | 0.197 |
GDE1_2508 | Glycerophosphochlorine phosphodiesterase | 0.389 | 0.313 | 0.000 | 0.000 |
GOG_B1_15792 | Golgin sub-family B member 1 | 0.150 | 0.289 | 0.050 | 0.049 |
GPX_4_19607 | Glutathione peroxidase 4 | 0.100 | 0.095 | 0.000 | 0.000 |
HMG_T_9973 | High mobility group-T protein | 0.050 | 0.049 | 0.025 | 0.025 |
HSP_90A_15666 | Heat shock protein 90 alpha | 0.158 | 0.229 | 0.063 | 0.061 |
HSP_90B_21100 | Heat shock protein 90 beta | 0.150 | 0.139 | 0.107 | 0.107 |
HSPE_1_17854 | 10 kDa heat shock protein | 0.368 | 0.362 | 0.009 | 0.009 |
IF_RF2_19747 | Interferon regulatory factor 2 | 0.150 | 0.139 | 0.000 | 0.000 |
JAM_3_13916 | Junctional adhesion molecule 3b | 0.053 | 0.051 | 0.131 | 0.165 |
KRT_13_20618 | Keratin | 0.350 | 0.499 | 0.325 | 0.317 |
KRT_A_15738 | Keratin alpha-like | 0.000 | 0.000 | 0.022 | 0.022 |
LBL_L2_20921 | No hit | 0.000 | 0.000 | 0.000 | 0.000 |
LDH_B_9441 | Lactase dehydrogenase B | 0.600 | 0.455 | 0.025 | 0.025 |
MDH_1393 | Malate dehydrogenase | 0.263 | 0.450 | 0.298 | 0.493 |
MYH_14857 | Superfast myosin heavy chain | 0.300 | 0.255 | 0.563 | 0.496 |
NADH_4_21742 | NADH dehydrogenase subunit 4 | 0.000 | 0.0180 | 0.000 | 0.000 |
NADH_5_17101 | NADH dehydrogenase subunit 5 | 0.000 | 0.255 | 0.000 | 0.019 |
NADH1_10_21119 | NADH dehydrogenase 1 alpha subunit 10 | 0.300 | 0.455 | 0.000 | 0.000 |
NCP_2_15547 | Nucleolar complex protein 2 | 0.350 | 0.289 | 0.085 | 0.087 |
NEX_19953 | Nexilin | 0.450 | 0.489 | 0.476 | 0.496 |
NGD_21138 | Neuroguidin | 0.450 | 0.469 | 0.238 | 0.273 |
NRAP_1541 | Nebulin-related anchoring protein | 0.500 | 0.455 | 0.031 | 0.031 |
PA2G4_2600 | Proliferation associated protein 2G4 | 0.444 | 0.401 | 0.442 | 0.481 |
PFN_15113 | Profilin-2 | 0.400 | 0.375 | 0.000 | 0.000 |
PGD_18096 | 6-phosphogluconate dehydrogenase | 0.000 | 0.000 | 0.042 | 0.053 |
PGI_1 | Phosphoglucose isomerase-1 | 0.211 | 0.188 | 0.338 | 0.348 |
PGI_2 | Phosphoglucose isomerase-2 | 0.368 | 0.478 | 0.456 | 0.498 |
PGK_1_11454 | Phosphoglycerate kinase 1 | 0.474 | 0.362 | 0.090 | 0.092 |
PRP_40_16504 | Pre-mRNA-processing factor 40 homolog A | 0.150 | 0.219 | 0.205 | 0.214 |
PSA_4_21534 | Proteasome subunit alpha type-4 | 0.350 | 0.439 | 0.484 | 0.498 |
PSME_1_21196 | Proteasome activator | 0.235 | 0.458 | 0.441 | 0.457 |
RFC_3_18186 | Replication factor C subunit 3 | 0.350 | 0.289 | 0.416 | 0.368 |
RTF_1_21288 | RNA polymerase-associated protein RTF1 homolog | 0.632 | 0.432 | 0.339 | 0.374 |
SDH_O | Sorbitol dehydrogenase | 0.000 | 0.000 | 0.000 | 0.000 |
SLC_25A5_19808 | ADP/ATP translocase 2 | 0.450 | 0.499 | 0.006 | 0.006 |
SM_22_6449 | Transgelin | 0.550 | 0.499 | 0.074 | 0.083 |
SN4_TDR_374 | Taphylococcal nuclease domain-containing protein 1 | 0.526 | 0.465 | 0.182 | 0.191 |
TENT_02_11046 | No hit | 0.111 | 0.105 | 0.318 | 0.362 |
TENT_03_12589 | Collagen type XXVIII alpha 1 a | 0.150 | 0.219 | 0.041 | 0.040 |
TENT_05_19704 | No hit | 0.500 | 0.461 | 0.013 | 0.013 |
TENT_06_16512 | Protein Phosphatase regulatory subunit | 0.105 | 0.266 | 0.510 | 0.484 |
TENT_07_21161 | No hit | 0.700 | 0.451 | 0.744 | 0.477 |
TNNT_2E_20968 | Troponin T2e | 0.000 | 0.000 | 0.168 | 0.196 |
TRIM_35_8416 | Tripartite motif-contaning protein 35 | 0.368 | 0.450 | 0.361 | 0.426 |
TTN_B_20952 | Titin b | 0.421 | 0.332 | 0.003 | 0.003 |
TUB_A_19211 | Tubulin alpha 2 | 0.550 | 0.489 | 0.010 | 0.009 |
UBI_A52_5049 | Ubiquitin A-52 residue ribosomal protein fusion product 1 | 0.474 | 0.362 | 0.058 | 0.056 |
UGP_2_2128 | UDP-glucose pyrophosphorylase 2 | 0.316 | 0.808 | 0.236 | 0.771 |
UGP_A_2307 | Glycerol-3-phosphate transporter subunit | 0.600 | 0.334 | 0.733 | 0.466 |
UNA_SINE2_16912 | Eel Short interspersed elements | 0.000 | 0.000 | 0.000 | 0.000 |
ZETA_15177 | Tyr 3-monooxygenase/Trp 5-monooxygenase activation protein | 0.421 | 0.388 | 0.246 | 0.245 |