Skip to main content

Table 2 Detection of outlier loci using the F ST -outlier approach implemented in LOSITAN and BAYESCAN based on the full data set with 8 locations (78 loci) and a reduced data set with 7 locations (80 loci)

From: Do North Atlantic eels show parallel patterns of spatially varying selection?

LOSITAN

  

Locus

Gene

Het

FST

p value

8 populations

    

MYH_14857

Superfast myosin heavy chain

0.490

0.042

0.018

GAPDH_20355

Glyceraldehyde-3-phosphate dehydrogenase

0.213

0.246

0.000

ALDH_2_16634

Aldehyde dehydrogenase 2

0.428

0.032

0.047

7 populations

    

GAPDH_20355

Glyceraldehyde-3-phosphate dehydrogenase

0.231

0.256

0.000

ALDH_2_16634

Aldehyde dehydrogenase 2

0.435

0.036

0.012

ALD_R

Aldose reductase

0.346

0.156

0.000

BAYESCAN

    

Locus

Gene

BPP

q value

alpha

F ST

8 populations

     

GAPDH_20355

Glyceraldehyde-3-phosphate dehydrogenase

1.000

0.000

3.376

0.123

7 populations

     

GAPDH_20355

Glyceraldehyde-3-phosphate dehydrogenase

1.000

0.000

2.424

0.116

ALD_R

Aldose reductase

1.000

0.000

2.150

0.091

  1. Heterozygosity and FST values are detailed for all outlier loci detected in LOSITAN. Bayesian posterior probabilities (BPP), q values, alpha coefficients and FST values are detailed for all outlier loci detected in BAYESCAN.