Table 3 Genes contained in the sequenced Camellia chloroplast genomes

Self replication

Large subunit of ribosomal proteins

rpl2^b,c, 14, 16^b, 20, 22, 23^c, 32, 33, 36

Small subunit of ribosomal proteins

rps2, 3, 4, 7^c, 8, 11, 12^b-d, 14, 15, 16^b, 18, 19

DNA dependent RNA polymerase

rpoA, B, C1^b, C2

rRNA genes

rrn4.5^c, 5^c, 16^c, 23^c

tRNA genes

trnA-UGC^b,c, C-GCA, D-GUC, E-UUC, F-GAA, G-UCC, G-GCC^b, H-GUG, I-CAU^c, I-GAU^b,c, K-UUU^b, L-UAG, L-CAA^c, L-UAA^b, M-CAU, fM-CAU, N-GUU^c, P-UGC, Q-UUG, R-ACG^c, R-UCU, S-GGA, S-GCU, S-UGA, T-GGU, T-UGU, V-UAC^b, V-GAC^c, W-CCA, Y-GUA

Photosynthesis

Photosystem I

psaA, B, C, I, J, ycf3^a, ycf4

Photosystem II

psbA, B, C, D, E, F, H, I, J, K, L, M, N, T, Z

NADH oxidoreductase

ndhA^b, B^b,c, C, D, E, F, G, H, I, J, K

Cytochrome b6/f complex

petA, B^b, D^b, G, L, N

ATP synthase

atpA, B, E, F^b, H, I

Rubisco

rbcL

Other gene

Translational initiation factor

infA

Maturase

matK

Protease

clpP^a

Envelop membrane protein

cemA

Subunit Acetyl-CoA-carboxylase

accD

c-type cytochrom synthesis gene

ccsA

Unknown gene

Conserved Open Reading Frames

ycf1, 2^c,15^c, orf42