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Table 3 Estimates of polymorphism (nucleotide diversity (Ï€) and Tajima's D) within each subspecies and genetic differentiation (F ST ) between pairs of subspecies for each nuclear region

From: Differential introgression among loci across a hybrid zone of the intermediate horseshoe bat (Rhinolophus affinis)

 

N

Ï€

Tajima's D

FST

Locus

him

mac

hai

him

mac

hai

him

mac

hai

him-mac

hai-mac

him-hai

Cx22

28

13

12

0.017

0

0

-1.156

0

0

0.95

0

0.95

Usp9x

42

12

9

0

0.079

0.116

0

1.381

0.196

0.94

-0.06

0.94

Pola1

20

11

8

0.287

1.187

0.404

-0.509

0.823

1.293

0.67

0.34

0.81

Chd1

42

15

17

0.067

0.036

0.089

-1.726*

-1.503

0.103

0.91

0.61

0.86

H2a

25

15

10

1.019

0.289

0.097

1.064

-0.931

0.426

0.54

0.09

0.54

Sws1

48

12

7

0.353

0.267

0.416

0.944

-1.288

-1.576*

0.54

0.62

0.77

Thy

17

11

17

0.759

0.041

0.073

0.658

-1.129

0.292

0.47

0.08

0.53

Tg

20

10

10

0.213

0.895

0.802

-1.156

0.170

-0.108

0.56

0.14

0.50

Prestin-4

23

12

9

0.518

0.579

0.284

-0.133

-1.062

-1.446

0.62

0.64

0.73

Prestin-8

14

9

8

0.193

0.544

0.547

-1.246

1.179

0.637

0.59

0.23

0.71

Prestin-17

14

9

10

0.646

0.439

0.567

0.136

0.087

1.876

0.36

0.26

0.38

Prestin-18

13

11

9

0.784

0.435

0.330

1.103

0.185

1.456

0.43

0.06

0.46

FoxP2

23

12

9

0.315

0.204

0.054

0.486

0.327

-1.385

0.65

0.17

0.73

Kcnq4

16

11

8

0.164

0.081

0.064

1.999

-0.532

-1.401

0.31

0.06

0.28

  1. N is the number of individuals analyzed for each nuclear region within each subspecies. him represents himalayanus; mac represents macrurus; hai represents hainanus. *P < 0.05.