Skip to main content

Table 5 d N /d S ratio of internal segments of Eurasian AIV

From: Reassortment patterns of avian influenza virus internal segments among different subtypes

 

PB2

PB1

PA

NP

M1

NS1

segmenta

0.14 (0.14,0.15)

0.12 (0.12,0.13)

0.17 (0.17,0.17)

0.13 (0.13,0.14)

0.11 (0.11,0.12)

0.59 (0.15,1.03)

subtypeb

      

H1N1

0.31 (0.15,0.46)

0.23 (0.09,0.37)

0.30 (0.16,0.43)

0.64 (0.11,0.38)

0.02 (0.02,0.11)

0.49 (0.06,0.91)

H3N8

0.31 (0.19,0.43)

0.25 (0.16,0.34)

0.31 (0.21,0.42)

0.35 (0.14,0.24)

0.15 (0.03,0.28)

0.77 (0.39,1.15)

H4N6

0.22 (0.13,0.30)

0.41 (0.26,0.55)

0.31 (0.19,0.43)

0.47 (0.16,0.31)

0.34 (0.06,0.62)

0.46 (0.15,0.78)

H5N1

0.56 (0.48,0.64)

0.56 (0.48,0.65)

0.92 (0.80,1.04)

0.80 (0.57,0.69)

0.65 (0.48,0.82)

0.97 (0.78,1.15)

H5N2

0.42 (0.29,0.54)

0.29 (0.20,0.37)

0.35 (0.24,0.46)

0.49 (0.24,0.36)

0.23 (0.09,0.37)

0.41 (0.16,0.65)

H5N3

0.36 (0.22,0.49)

0.34 (0.20,0.48)

0.22 (0.13,0.31)

0.51 (0.19,0.35)

0.15 (0.02,0.29)

0.50 (0.15,0.84)

H6N1

0.76 (0.55,0.96)

0.60 (0.45,0.75)

0.57 (0.39,0.74)

0.64 (0.36,0.50)

0.73 (0.38,1.08)

0.83 (0.56,1.11)

H6N2

0.42 (0.29,0.54)

0.27 (0.20,0.35)

0.33 (0.24,0.41)

0.43 (0.21,0.32)

0.50 (0.25,0.75)

0.56 (0.32,0.80)

H6N5

0.53 (0.14,0.92)

0.46 (0.22,0.69)

0.41 (0.20,0.62)

0.77 (0.15,0.46)

0.04 (0.04,0.25)

0.72 (0.12,1.32)

H7N1

0.40 (0.21,0.59)

0.43 (0.19,0.67)

0.37 (0.18,0.56)

0.98 (0.24,0.61)

0.53 (0.08,1.14)

0.76 (0.12,1.40)

H7N3

0.73 (0.08,1.39)

0.57 (0.33,0.80)

0.57 (0.28,0.86)

0.95 (0.17,0.56)

1.05 (0.21,1.89)

1.01 (0.07,2.43)

H7N7

0.40 (0.19,0.61)

0.45 (0.20,0.71)

0.29 (0.16,0.42)

0.52 (0.08,0.30)

0.03 (0.05,0.21)

0.35 (0.03,0.84)

H9N2

0.55 (0.46,0.64)

0.59 (0.52,0.67)

0.64 (0.56,0.72)

0.80 (0.56,0.68)

0.57 (0.40,0.74)

0.92 (0.72,1.12)

  1. aEstimated overall dN/dS ratio per internal segment. Mean ratio of each internal segments with 95% (CI) of all MCMC samples shown in brackets.
  2. bEstimated dN/dS ratio per H-N combined subtype in each internal segment. Mean dN/dS of each subtype on MCMC tree nodes with 95% CI of all MCMC samples are shown in brackets.