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Table 2 Datasets

From: An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines

Dataset Strategies that use the dataset Number of strategies Description
D s Concatenation or SMRT with ML, MP, or NJ 18 Consists of all 121 loci, with a single individual sampled from each of 11 species at each locus.
D s , 0 STEAC, STAR, RTC, or MDC with ML, MP, or NJ 36 Subset of D s requiring that each locus has at least one sequence difference between each distinct pair of species, other than pairs from distinct outgroups.
D p Concatenation or SMRT with M 6 Consists of the full dataset , which contains all individuals and all loci.
D p , 0 STEAC, STAR, RTC, or MDC with M 12 Subset of D p requiring that each locus has at least one sequence difference between each distinct pair of species, other than pairs from distinct outgroups.