Inferring bacteriophage infection strategies from genome sequence: analysis of bacteriophage 7-11 and related phages

Table 2 Predicted bacterial σ70-dependent promoter elements in 7 - 11 genomic sequence.

Gene	-35 element ttgaca	Spacer Length	-10 element tataat	Genomic Coordinate (complement)	Motif Score
151	ttgaca	17 bp	tatagt	101:129	-2.78
151	ttgaca	17 bp	taatct	194:222	-2.95
151	ttgcaa	17 bp	taatat	288:316	-3.24
151	ttgccg	17 bp	tagagt	89002:89030	-3.27
96	atgaaa	18 bp	tacaat	59756:59785	-3.67
99	ttgcct	16 bp	tatatt	61590:61617	-3.97
151	ttagta	17 bp	taaaat	323:351	-3.98
99	tttcag	18 bp	tataat	61562:61591	-4.09

Different columns in the table denote (from left to right): i) the downstream gene number, ii) -35 element sequence, iii) the length of the spacer, iv) -10 element sequence, v) coordinate in genome of the promoter element, vi) score of the predicted promoter (see Methods).

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