From: Position specific variation in the rate of evolution in transcription factor binding sites
Cluster | Factor | Consensus identified by MEME | Motif subs. | Bg subs. | Corr. | p-value |
---|---|---|---|---|---|---|
Protein folding + | Hsf1p | TTTTC TAGAA AGTTC | 0.14 | 0.68 | -0.42 | 0.060 |
Glycolysis + | Gcr1p | AAATAGAGGAAG CCCA | 0.23 | 0.63 | -0.80 | <0.001 ** |
Nitrogen + | Gln3p/ Dal80p | TCTTAT CA | 0.39 | 0.74 | -0.78 | 0.010 * |
Gluco-neogenesis + | Sip4p (?) CSRE | CC GTTTGTCCG | 0.33 | 0.57 | -0.84 | <0.001 ** |
G1 phase + | Mbp1p Swi6 | TTACGCGT TTT | 0.22 | 0.64 | -0.67 | 0.011 * |
Respiration + | Hap2/3/4p | TGATTGG TCCA | 0.20 | 0.67 | -0.53 | 0.048 * |
Methionine + | Cbf1p | ATGTCACGTG | 0.13 | 0.75 | -0.49 | 0.078 |
Proteasome + | Rpn4p | ATTTTGCCACC G | 0.20 | 0.73 | -0.75 | 0.002 * |
M/G1 transition + | Swi5p/ Ace2p | AACCAGC A | 0.26 | 0.61 | -0.57 | 0.074 |
Repressed in Stress ++ | (?) PAC | ATGCGATGAG CTGAG | 0.24 | 0.71 | -0.69 | 0.006 * |
leu/ilv bio-synthesis++ | Leu3p | GCCG TTTCCGG | 0.31 | 0.70 | -0.54 | 0.044 * |
Phosphate +++ | Pho4p | CCCACGTG CG | 0.29 | 0.65 | -0.74 | 0.005 * |
119 positions in all computationally identified motifs | -0.60 | 4e-14 ** |