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Table 3 Non-rp top genes

From: The architecture of mammalian ribosomal protein promoters

GENE

TATA Quality

% H/M identity in 400 bp *

GABP

SP1

YY1

Other

Initiator -2 to +7 †

AUG

 

Hs

Mm

         

eEF1A1

+

+

44

  

1,

2

  

TT C TTTTTC

E2

eEF1B

+

+

68

2

 

1

   

TC C TTTTTY

E1

eEF2

+

+

55

  

4

 

2

 

KT C TCYYCC

E1e

PABP cl

+

+

66

  

2,

1

  

TT C CCCTTC

E1

hnRNPA1

–

–

71

  

2

   

YT C CTTTCT

E1

B23

+

+

73

  

1,

1

 

BoxA

TT C CYTGGC

E1

Tpt1

+

+

67

 

1

1

1

  

GC C TTTTCC

E1

gas5

+

+

55

  

1,

2

  

RK C YTTTCG

--

U17HG

+

+

43

1

     

ST C YYTYTW

--

  1. * From -300 to +100 relative to the tsp.
  2. † The bolded C is the tsp.
  3. Other symbols are as in Table 1.