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Table 2 List of Cryptomonas strains examined in this study with accession numbers to EMBL/GenBank/DDBJ entries

From: Lineage-specific variations of congruent evolution among DNA sequences from three genomes, and relaxed selective constraints on rbcL in Cryptomonas (Cryptophyceae)

Species/Clade

Strain

Nucleus

Nucleom.

Plastid

  

ITS2+LSUp

SSU rDNA

SSU rDNA

rbcL

C. borealis

CCAC 0113

[EMBL:AJ566160]

[EMBL:AM051188]

[EMBL:AJ566185]

[EMBL:AM051202]

 

SCCAP K-0063

[EMBL:AJ566159]

[EMBL:AJ420696]

[EMBL:AJ420688]

[EMBL:AM051203]

C. curvata

CCAC 0006

[EMBL:AJ566147]

[EMBL:AJ007280]

[EMBL:AJ420682]

[EMBL:AM051204]

 

CCAC 0080

[EMBL:AJ566148]

[EMBL:AM051189]

[EMBL:AJ715462]

[EMBL:AM051205]

C. gyropyrenoidosa

CCAC 0108

[EMBL:AJ566154]

[EMBL:AJ421149]

[EMBL:AJ420686]

[EMBL:AM051206]

C. lundii

CCAC 0107

[EMBL:AJ566161]

[EMBL:AM051190]

[EMBL:AJ566184]

[EMBL:AM051207]

C. marssonii

CCAC 0086

[EMBL:AJ566155]

[EMBL:AM051191]

[EMBL:AJ566173]

[EMBL:AM051208]

 

CCAC 0103

[EMBL:AJ715444]

[EMBL:AM051192]

[EMBL:AJ566174]

[EMBL:AM051209]

C. ovata

CCAC 0064

[EMBL:AJ566153]

[EMBL:AM051193]

[EMBL:AJ566178]

[EMBL:AM051210]

 

M1171

[EMBL:AJ566152]

[EMBL:AJ420695]

[EMBL:AJ420687]

[EMBL:AM051211]

C. paramaecium

CCAC 0056

[EMBL:AJ566158]

[EMBL:AJ007276]

[EMBL:AJ420676]

[EMBL:AM051212]

 

CCAP 977/1

[EMBL:AJ715445]

[EMBL:AM051194]

[EMBL:AJ715465]

[EMBL:AM051213]

 

M2180

[EMBL:AJ715451]

[EMBL:AM051195]

[EMBL:AJ715471]

[EMBL:AM051214]

 

M2452

[EMBL:AJ715452]

[EMBL:AM051196]

[EMBL:AJ715472]

[EMBL:AM051215]

C. pyrenoidifera

CCAP 979/61

[EMBL:AJ566142]

[EMBL:AJ421147]

[EMBL:AJ420684]

[EMBL:AM051216]

 

CCMP 152

[EMBL:AJ566140]

[EMBL:AJ421150]

[EMBL:AJ420675]

[EMBL:AM051217]

 

M1077

[EMBL:AJ566144]

[EMBL:AM051197]

[EMBL:AJ566180]

[EMBL:AM051218]

C. tetrapyrenoidosa

M1092

[EMBL:AJ566146]

[EMBL:AM051198]

[EMBL:AJ566182]

[EMBL:AM051219]

 

NIES 279

[EMBL:AJ715455]

[EMBL:AM051199]

[EMBL:AJ566183]

[EMBL:AM051220]

NoPyr

CCAC 0031

[EMBL:AJ566166]

[EMBL:AJ007281]

[EMBL:AJ420685]

[EMBL:AM051221]

 

CCAC 0109

[EMBL:AJ566165]

[EMBL:AJ420697]

[EMBL:AJ420683]

[EMBL:AM051222]

 

CCAP 979/46

[EMBL:AJ566167]

[EMBL:AM051200]

[EMBL:AJ566171]

[EMBL:AM051223]

 

M0741

[EMBL:AJ566163]

[EMBL:AM051201]

[EMBL:AJ566172]

[EMBL:AM051224]

  1. Abbreviations: CCAC, Culture Collection of Algae at the University of Cologne (Germany); CCAP, Culture Collection of Algae and Protozoa (UK); CCMP, Provasoli-Guillard Center for the Culture of Marine Phytoplankton (USA); ITS2, nuclear internal transcribed spacer 2; LSUp, partial nuclear large subunit ribosomal DNA (28S rDNA or LSU rDNA, approx. 800 nt of 5' terminus); M, Algal Culture Collection Melkonian at the University of Cologne (Germany); NIES, Culture Collection of The National Institute for Environmental Studies (Japan); rbc L, large subunit gene of ribulose-1,5-bisphosphate carboxylase/oxygenase; SCCAP, Scandinavian Culture Centre for Algae and Protozoa (Denmark); SSU rDNA, small subunit ribosomal DNA (18S rDNA, nuclear or nucleomorph).
  2. New sequences: acc. nos. AM051188 to AM051224.
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BMC Ecology and Evolution

ISSN: 2730-7182

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