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Figure 6 | BMC Evolutionary Biology

Figure 6

From: Bayesian and maximum likelihood phylogenetic analyses of protein sequence data under relative branch-length differences and model violation

Figure 6

Simulated data: relationship between ML consensus bootstrap proportion and Bayesian posterior probability. Relationship between bootstrap proportion for ML consensus trees, and posterior probability for Bayesian trees, for datasets with one (A-C) or two (D-F) branches of relatively greater length. Bayesian trees were inferred (A and D) without ASRV correction and with a uniform prior, (B and E) with gamma correction for ASRV and with a uniform prior, and (C and F) with gamma correction and with an exponential prior. Panel D does not show data at relative branch-length ratios ≥ 50 because none of the trees inferred at these branch-length ratios recovered the known topology.

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