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Table 2 Identifiable functions of the Vibrio sp. DAT722 gene cassette encoded proteins

From: Recovery and evolutionary analysis of complete integron gene cassette arrays from Vibrio

Cassette no.

Putative function

Source of best hita

E-value

Identity (%)

 

DNA modification

   

11

DNA topoisomerase I

Shewanella amazonensis

1E-96

68

57

NUDIX hydrolase

Deinococcus radiodurans

1E-29

46

59

DNA topology modulation protein

Bacillus cereus

5E-45

51

 

Primary metabolism

   

5

4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis

Bacillus anthracis

3E-15

29

31

beta-phosphoglucomutase

Vibrio vulnificus

4E-86

70

75

selenocysteine lyase

Anabaena variabilis

4E-44

55

78

maltose O-acetyltransferase

Methanosarcina acetivorans

9E-41

47

 

Other

   

2

lysogenic conversion protein

Bacteriophage P2-EC5

5E-41

33

20

antibiotic biosynthesis monooxygenase

Ralstonia eutropha

3E-34

64

24

acetyltransferase

Streptomyces avermitilis

6E-27

33

39

acetyltransferase

Vibrio parahaemolyticus

9E-86

99

54

acetyltransferase

Legionella pneumophila

1E-17

31

84

acetyltransferase

Paracoccus denitrificans

3E-26

39

88 & 91

acetyltransferase

Vibrio vulnificus

3E-67

66

103

acetyltransferase

Vibrio fischeri

4E-61

76

69

histone acetyltransferase

Vibrio vulnificus

1E-16

31

74

haemagglutinin associated protein

Vibrio cholerae

1E-116

88

97

cold shock domain

Vibrio vulnificus

5E-71

77

102

toxin-antitoxin plasmid stability system

Vibrio vulnificus

4E-48

94

  1. aBLASTP hits from non-redundant database as of July 2005