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Figure 4 | BMC Evolutionary Biology

Figure 4

From: Phylogenetic analyses of Vitis (Vitaceae) based on complete chloroplast genome sequences: effects of taxon sampling and phylogenetic methods on resolving relationships among rosids

Figure 4

Phylogenetic trees of 29-taxon data set (including Gossypium) based on 61 chloroplast protein-coding genes using maximum parsimony (MP) and maximum likelihood (MP). (A) The MP tree has a length of 51,056, a consistency index of 0.46 (excluding uninformative characters) and a retention index of 0.61. (B) The ML tree has a ML value of – lnL = 296670.545. Numbers at nodes indicate bootstrap support ≥ 50%. Arrows indicate taxa that have lost the rpl22 gene. Ordinal and higher level group names follow APG II [94]. Taxa in red are members of eurosid I and Vitis is indicated in blue. Thicker lines in tree indicate members of Eudicots.

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