Skip to main content
Figure 2 | BMC Evolutionary Biology

Figure 2

From: A protein evolution model with independent sites that reproduces site-specific amino acid distributions from the Protein Data Bank

Figure 2

Comparison of the site-specific amino acid distribution π i (a) obtained from simulations of the SCN model for ATPE (PDB code 1aqt, full symbols) and from the mean-field model (lines and open symbols) at site i = 128 with c i /<c> = 0.43 [(a) and (b)] and at site i = 82 with c i /<c> = 1.55 [(c) and (d)]. The upper panels (a) and (c) show the case of high GC mutational bias, whereas the lower ones (b) and (d) show low GC mutational bias.

Back to article page

BMC Ecology and Evolution

ISSN: 2730-7182

Contact us