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Table 2 Location of introns within Vps25 sequences.

From: Genetic structure and evolution of the Vps25 family, a yeast ESCRT-II component

Speciesa

Intron number (and phase)

 

0 (2)

I (2)

II (1)

III (1)

IV (0)

V (1)

CHROMALVEOLATES

      

Theileria annulata

x

√b

x

x

x

x

Theileria parva

x

√b

x

x

x

x

Paramecium primaurelia

√

x

x

x

x

√

AMOEBOZOA

      

Entamoeba histolytica

x

√

√

x

x

x

Dictyostelium discoideum

x

x

√

x

x

x

PLANTAE

      

Oryza sativa

x

√

√

√

√

√

Arabidopsis thaliana

x

√

√

√

√

√

OPISTHOKONTS

      

Fungi

      

Ascomycetes

      

Aspergillus fumigatus

x

x

√

x

√

√

Aspergillus oryzae

x

x

√

x

√

√

Botryotinia fuckeliana

x

x

√

x

x

√

Coccidioides immitis

x

x

x

x

√

x

Cryptococcus neoformans

x

√

√

x

√

√c

Gibberella zeae

x

x

√

x

x

√

Neosartorya fischeri

x

x

√

x

√

√

Schizosaccharomyces pombe

x

x

x

x

√

x

Sclerotinia scleroriorum

x

x

√

x

x

√

Trichoderma reesei

x

x

√

x

x

√

Uncinocarpus reesii

x

x

x

x

√

x

Basidiomycetes

      

Coprinus cinereus

x

√

x

x

√

x

Phanerochaete chrysosporium

x

√

x

x

√

x

Zygomycete

      

Rhizopus oryzae

x

√

√

√

√

√

Metazoa

      

Echinodermata

      

Strongylocentrotus purpuratus

x

√

√

√

√

√

Nematoda

      

Caenorhabditis briggsae

x

√

√

√

x

√

Caenorhabditis elegans

x

√

√

√

x

√

Arthropoda

      

Anopheles gambiae

x

√

x

x

x

x

Apis mellifera

x

√

√

x

x

√

Drosophila melanogaster

x

√

x

x

x

x

Drosphila pseudoobscura

x

√

x

x

x

x

Chordata

      

Fugu rubripes

x

√

√

√

√

√

Tetraodon nigroviridis

x

√

√

√

√

√

Bos taurus

x

√

√

√

√

√

Canis familiaris

x

√

√

√

√

√

Homo sapiens

x

√

√

√

√

√

Monodelphis domestica

x

√

√

√

√

√

Mus musculus

x

√

√

√

√

√

Rattus norvegicus

x

√

√

√

√

√

  1. aSpecies known to lack introns in VPS25 genes are listed in Additional File 1.
  2. bIntron I of the apicomplexan species examined appears to have undergone 'slippage' and is now in phase 0, and is seven nucleotides downstream to all other intron I positions.
  3. cSee comments in Additional File 2.