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Table 1 Summary of data sets of 18S rDNA, RPB1 and RPB2 and their branch support values under maximum parsimony (MP) criterion for single locus and combined analyses.

From: Loss of the flagellum happened only once in the fungal lineage: phylogenetic structure of Kingdom Fungi inferred from RNA polymerase II subunit genes

Characters

18S rDNA Nucleotide

RPB1 Amino acids

RPB2 Amino acids

RPB1 & RPB2 Amino acids

aligned

2388 bp

1119 (3357bp)

944 (2832bp)

2063 (6189bp)

excluded

649

58

43

101

included

1739

1061

901

1962

constant

745

257

244

501

parsimony-informative

738(31%)

723 (65%)

566 (60%)

1289 (63%)

No. of clades > 70% bootstrap

25 (59%)

31 (74%)

30 (71%)

33 (79%)