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Table 3 Parameter estimates for the lipase/esterase data (n = 12)

From: Tracking the connection between evolutionary and functional shifts using the fungal lipase/feruloyl esterase A family

Model

p

l

Parameters estimates

Positively selected sites

M0: one-ratio

1

-5974.07

ω = 0.0621

None

Branch-site model:

    

Model A

3

-5925.68

p0 = 0.503, p1 = 0.102

(p2 + p3) = 0.393

ω2 = 14.201

Sites for foreground lineage: 17M 19T 22Q 29C 51W 63T 70G 71D 74L 75Q 76L 103G 126A 163S 209G 226V 248T 257A (at P > 0.95)

  1. Note: p is the number of free parameters for the ω ratios. Parameters indicating positive selection are presented in boldtype. Sites potentially under positive selection were identified using the mature FaeA (A. niger) according to the Bayes Empirical Bayes analyses for Model A.
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BMC Ecology and Evolution

ISSN: 2730-7182

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