Skip to main content
Figure 3 | BMC Evolutionary Biology

Figure 3

From: Multiple domain insertions and losses in the evolution of the Rab prenylation complex

Figure 3

Maximum Likelihood reconstruction of the evolutionary relationships between the LRR domains found in RGGTase a-subunit (red branches) and reference sequences representing other superfamilies of LRR domains – L-domain-like, internalin LRR (106v) – green; RNI-like, 28-residue LRR, Ribonucelase inhibitor (1A4Y) – blue; RNI-like, RanGAP1, N-terminal domain(1K5D) – purple; outer arm dynein light chain(1M9L) – orange; L-domain-like, RabGGTase α-subunit, C-terminal domain (1LTX) – red. Inset boxes show the topologies of Bayesian and Neighbor Joining trees of the same sequences, showing contradicting topologies. Species codes are Aaeg – Aedes aegypti; Atha – Arabidopsis thaliana; Bthr-Bacillus thrugiensis; Cbri – Caenorhabditis briggsae; Cele – Caenorhabditis elegans; Cint – Ciona intestinalis; Crei – Chlamydomonas reinhardtii; Dmel – Drosophila melanogaster; Hsap – Homo sapiens; Liva – Listeria ivanovii, Lmon – Listeria monocytogenes; Mmus – Mus musculus; Osat – Oryza sativa; Pfal-Plasmodium falciparum; Ptri – Populus trichocarpa; Ptro – Pan troglodytes; Pyoe-Plamodium yoelii; Rnor – Rattus norvegicus; Scer – Saccharomyces cerevisae;Spom – Schizosaccharomyces pombe; Tbru – Trypanosoma brucei

Back to article page