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Table 1 Sampling and provenance of genotypes sampled

From: DNA evidence for global dispersal and probable endemicity of protozoa

Biogeog. region

Provenance

Habitat

#eDNAs screened (# successful amplifications, where known)

#18S-types

#ITS-types

#ITS-types found only in this biogeog. region

Date of collection (MM.YY)

GROUP α

Australasian

New Zealand

Soil & f/w sediment

8 (4)

1

4

6

02.03

 

Australia

Soil

4 (1)

1

4

 

12.04

 

Tasmania

Soil

4 (1)

1

4

 

12.04

Neotropical

Peru

Soil

7 (3)

1

5

2

07.05

 

Panama

Freshwater sediment

4 (4)

1

4

 

03.03

 

Panama

Coastal sediment

5 (3)

1

2

 

03.03

W. Palaearctic

Oxfordshire

Soil

7 (4)

1

4

2

07.03

 

UK

Coastal sediment

8 (7)

1

4

 

05.02

GROUP β

Australasian

New Zealand

Soil & f/w sediment

8

3

6

4

02.03

  

Coastal sediment

13

1

1

 

02.03

 

Tasmania

Soil

4 (1)

1

1

 

12.04

Oriental

Calcutta

Soil

4 (3)

1

1

0

02.05

Neotropical

Panama

Freshwater sediment

7

1

2

0

03.03

 

Panama

Coastal sediment

8

1

1

 

03.03

 

Peru

Soil

12

1

1

 

07.05

W. Palaearctic

UK & Europe

Coastal sediment

6

1

1

1

'03 & '04

 

UK & Europe

Soil

7

1

1

 

'03 & '04

E. Palaearctic

Japan

Freshwater sediment

6 (5)

1

2

0

12.04

Nearctic

BC

Coastal sediment

5

1

1

0

06&09.02

GROUP γ

Australasian

New Zealand

Soil & f/w sediment

8

1

5

3

02.03

  

Coastal sediment

5

1

2

 

02.03

 

Australia

Soil

4

1

4

 

12.04

Neotropical

Panama

Soil & f/w sediment

4

(11)

(11)

(11)

03.03

 

Panama

Coastal sediment

7

1

2

 

03.03

Ethiopian

South Africa

Soil

11

2 (+21)

4 (+21)

2 (+21)

12.03

W. Palaearctic

UK

Coastal sediment

11

1

5

1

05.02

 

Oxfordshire

Soil

4

1

5

 

07.03

E. Palaearctic

Japan

Freshwater sediment

5

1

2

0

12.04

Nearctic

BC

Soil

6

1

5

0

06&09.02

  1. (eDNA = environmental DNA sample – see Methods for more details.)
  2. (1) These additional genotypes were also detected, and were not recovered from any other site. (Not shown on Fig. 3.)