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Table 1 The structural characteristics of twelve transposons characterized from six xenobiotic-metabolizing P450 genes in H. zea

From: Transposable elements are enriched within or in close proximity to xenobiotic-metabolizing cytochrome P450 genes

element name

class

size, bp

characteristics

Location

laboratory strain

midgut cell line

Hztransib

transib

3518

TIRs,5bp-TSD

CYP6B8 promoter region

HzTc1

Tc1

1558

TIRs,2bp-TSD

CYP6B8 exon1

HzMITE1

MITEs

227

TIRs,2bp-TSD

CYP6B8 intron

HzCR1

non-LTR

1099

6-bpTSD

CYP6B cluster intergenic region

HzRTE-1-1

non-LTR

1754

10-bpTSD

CYP9A12v3 3rd intron

HzIS1-1

-

264

13-bpTSD

CYP9A14 1st intron

HzIS1-2

-

393

16-bpTSD

CYP9A14 7th intron

HzMITE2-1

MITEs

967

TIRs,2bp-TSD

CYP9A14 8th intron

HzMITE3

MITEs

945

9-bpTSD

CYP9A14 8th intron

HzRTE-1-2

non-LTR

62

7-bpTSD

CYP321A2 promoter region

ND

HzSINE1

SINEs

556

5-bpTSD

CYP321A2 exon

HzIS1-3

-

190

5-bpTSD

CYP321A cluster intergenic region

  1. * ND: Not detected; : present; : absent